Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3190g00001 ATGACAGAGGAGGAGAAACTCCCTGTTTTTATGGACGTCTTTATAGCCGGGATGTACTATGAAAGGATGGTTTTTGAGCTATTCTATGACATTGCCCCTTACACTGCAGAAGATTTCCGTGCGCTTTGTACAGGAGAAAAAGGAGTCAGTCCAAATGATACGTTTTTGTGTTACGCAAATTGCTTCTTTCACAAGGTTAAGAAAGGTGGCTCCTATGTGAAGGGAGGCGCCATAAACTACGAAACTGGGGAAGATGTTCAAAGTGTTTTTGGTCCATATTTCTTTGACGATGGGTCAAATAACTTGAAACATGACAAGGAAGGGCTCCTATCTATGCCCAGAAGAGACTTCAGAGATTGCCGTTCTCACTTTTTGATCACATTGAGAGCTGATGAGAGCCTTGACAGGACTCATGTGGTCACCGGGAAGCTTGTGGAAGGCATGGATACACTTCGAGAAATCGGACAGACTAGTTTTGACTGGGCGGTTAGAATTGTTGATTGTGGCATGTTATATAATGCTAGGAATATTCCTCCTGGAGTGATTATTAGGCCTTTGCCGCGCGGAAAGAGGGATGGGGTCTCCTCAAAGGGCAGGGAAAGACGTGAGGGAAGGAGAAAGAGGATAAAGAACGATGATCGGGATGACTCAAAGGGGAAGGAAAGACGTGAGGGAAGGAGGAGGAGGATAAAGAACGATGATCGGGATGACTCAAAGGGGAAGGAAAGACGTGAGGGAAGGAGGAGGAGGATAAAGGGGGATGGTCGGGATGACTATTGA 780 0.4603 MTEEEKLPVFMDVFIAGMYYERMVFELFYDIAPYTAEDFRALCTGEKGVSPNDTFLCYANCFFHKVKKGGSYVKGGAINYETGEDVQSVFGPYFFDDGSNNLKHDKEGLLSMPRRDFRDCRSHFLITLRADESLDRTHVVTGKLVEGMDTLREIGQTSFDWAVRIVDCGMLYNARNIPPGVIIRPLPRGKRDGVSSKGRERREGRRKRIKNDDRDDSKGKERREGRRRRIKNDDRDDSKGKERREGRRRRIKGDGRDDY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3190g00001 259 Gene3D - 1 177 IPR029000 -
Pral3190g00001 259 SUPERFAMILY Cyclophilin-like 9 176 IPR029000 -
Pral3190g00001 259 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 160 IPR002130 GO:0000413|GO:0003755
Pral3190g00001 259 MobiDBLite consensus disorder prediction 190 259 - -
Pral3190g00001 259 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 169 IPR002130 GO:0000413|GO:0003755
Pral3190g00001 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Pral3190g00001 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Pral3190g00001 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral3190g00001 259 MobiDBLite consensus disorder prediction 184 259 - -
Pral3190g00001 259 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3190g00001 Pral-Chr3190 26158 29911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3190g00001 25 173 U-box Gene Family AT5G67530 25.806 4.46e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3190g00001 K09566 - pcin:129288793 149.058