Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00048 ATGGCAGATACCGTTACTGCTGGTGCCTGTGCTTCTCCTGCTTCTGATTCTTTTACTTCTACTCATCCAACTCAGCCGACACGTTATCACGTTTTCCTGAGTTTTAGAGGGCCAGATAGTCGCAAAACTTTTACTGATCATTTATATGCTGCACTAGTACGGAAAGGGATTGTAACTTTTAGAGATGATGAAGATATTAAGAAAGGACAACCTGTTGAAGAGACACTCCGTGAAGCTATTCAGCAGTCTCTGTATTTCATTGTCGTCCTCTCTCAGCGATTTGCTTCTTCCCGGTGGTGTTTGAATGAGTTGCTGCAGATCCTCCAGGAAGCCAAGCAAAAGGAGAAAAGAGTCTTGCCGGTTTTTTATGATGTTGAACCGGGTAACATTGGACTAGCTTTGGCTAAACTTGAAGGAAAATATTCAAATAAGACAATAGAAAGATGGGAGCGAGCTTTGTCTGAGGTTGCCAAATTCGCTGGTTGGCCCGCTAAAAATAGACATGAAGCAAAACTAGTTGAAGAAATTGCCACAGAAATATGGAACAAATTATGTGTTGAACTGCCATCTAATTTCGAATATTTAGTTGGAGACATGAAATCAAAAGCGGAACGGATAATCTCCCTTCTAGGGATAGGACTGGATCATAAATGTATCATAGGAATATGGGGAATGGGTGGCGCAGGCAAAACCACTCTGGGTCGTTTTGTTTATAATACTGCCAATAAGAAAGGGAACTTTGAAGCTAGTTGTTTTCTTGCCGATATAAGGGAGGATTCAAAAAAGTTTGGCTTAGTTCACTTACAAAAGAAGCTCCTTTCTAATCTTCTACAAATGAAAGAACTAGATATAAAGGATTCCTTTCATGGAGCAGAGGTAATAAGAACATTTTTACGCCGTAAGAAAGTTCTTATTGTTTTGGATGATGTGAGCCATAGAAAACAGCTAGAGTATTTGGCTAGAAACAAGGAGTGGTTTGCTGAGGGAAGCAAAATAATAATAACTACAAGAGATAAACACTTGCTAACACAATATGAACATTCTTATGAGTTCAGAGTTGGCATGTTACCTGATGATGAATCCCTTAAGCTCTTAAACCAGAATGCATTCAAGAAGGATCAGCCAGAGAGTTTTACAAAATTATCAGAAGAAGTAGTTGGATATGCTGGTGGACATCCTATGGCACTTGAAGTCTTGGGATCATTTCTTTGTACAAGACAAGAACATGAATGGAGACGCACAATAGATACGTTAACGCAATATTTACGCAGAGAAATTTTAAGCCAACTTCGCGTTAGTTATGATGAGCTGGAAGAAGAGTACAAGACAATATTTTTGGATATTGCTTGTTTCTTTAACAAGGAGGCCAAATATAAGGTGGCAAATATGCTGAAAATATGCGGTCTAGATGAAATAGTTGGAATCAAAGTTCTTGCTGAGAAATCATTACTAAGTTCCCCCCAATCAAATCTGAAATTGTTGCAAAATGCAAGAGAATGTCAGAACATGCATGATAGTCTTGAAAAGACGAGAGGGAATTACACTGGAATGGAGGCACTTCCGCGGGAGGCGTTGGAAGAAGAGGCTTCAAAAGAATACCTGAATATGCATTATTTGCTTCAAGAGATGGGAAGGATCATTGTCTTCCAAGAATCTCCAATTAATGCCGGTGGACGCAGCAGATTGTGGTCATGGGAGGATATCAATCTTGTATTGAAGGAAAATAAGGGAACCAAACACGTTCAAAGTATAATTTTGGAGACACAGCAAAATGTTGTTGAAGCGGATTGGGACGCTAACTGCTTTTCAAAGATGATAAATCTTAGATTGCTGGACTTGAGTAAGGATCGTCTGCCTTCAATTGACGAATTATGGAATCTCCAAAGCCTTCAACTGTGCAATAGCAAAATCAAAAAACTATGGAAAGAAAATACGGTCTTGAATAAGCTGAGGATCATTGATATGAGTGGTTCAGAATGTCTAAGTGAAACCCCAGATTTGAGTGGAACACCAAACCTTGAAGAGTTGTTACTTAATGGTTGCAGAAACCTGATTCGGGTTGATGAATCTGTCGGACAGCTGAAGAAGCTGGTTAGGTTGGGTTTGAAAGGGTGTAGAATGCTTGAAACTCTACCCGCTCAGTTGGAAACGGATAATCTACGAGGGCTCATTCTTAAGGGATGTTTCGCACTTGTGAAGCTGCCCGACTTTGGTCAAAATATGACAAATCTATATTTCCTTGATGTGAGCGACACTGGGATCACTCAAATTCCTTCAACCATCAGTAATTTAATAGGTCTCAAGATCTTAGACGTGTGGAATTGCAACAACCTTGAGTCCCTACCTGCTGATCTTCCTCCTCATTTAAATGTGTGTGCAAACAACTCTCCCAAGCTGAAAGACGCAATAGCTCAACTTAATCTCTGTGCACCGCTTGTACCAATGCGCCCTGTGGATCTGCAGGGTCCCATTCACATCTTTGTTGAATTCGAAGCAGGGGCAACAACCTTAGAATGGTTTAAATGTTCGGAATACTGGTGGGGTAAGGATCCCTCATCAGGTGAATTTGCAACCATAACAGCAGACATACCTTCCAAAGTTGTTGCAGATTCTAATGAACAATGCTGGGGAATTGCTGTATGCCTTTTTCTTAAATCCAAATCTCAAGCATCGCAAAGAAGTTACATAGTTTGGAGTTTCCAAAATGGATGCCATAGCGACGATAAAACTAAAATGGATGGAAACCTGGAGCCGGACGATGATTGTGTGGTTTATGTTGGATTTTACCCTCTTGATAATAAAAAGCGTCGCGAAGCCAGCCAACTCCATTTAAGTCTTTCTATCCTAACAACCAGCACTGCTAGGGATCTCCATGATTGGGAAATAAGGGGATGTTGGTGGCGTCTGGTAAGAAAAGTTAAGTTTGATAAATGGAGGGAAGATGATGGAGCAGCATCACCTTCTGGACATGGCTCCTCTAACAGTGAGAGGGGAGAAAGTGGCCATGGCGTTACCGAAAGGCGTGGAAAAAGAAAATATGAAGAAATTCTGTAA 3054 0.4064 MADTVTAGACASPASDSFTSTHPTQPTRYHVFLSFRGPDSRKTFTDHLYAALVRKGIVTFRDDEDIKKGQPVEETLREAIQQSLYFIVVLSQRFASSRWCLNELLQILQEAKQKEKRVLPVFYDVEPGNIGLALAKLEGKYSNKTIERWERALSEVAKFAGWPAKNRHEAKLVEEIATEIWNKLCVELPSNFEYLVGDMKSKAERIISLLGIGLDHKCIIGIWGMGGAGKTTLGRFVYNTANKKGNFEASCFLADIREDSKKFGLVHLQKKLLSNLLQMKELDIKDSFHGAEVIRTFLRRKKVLIVLDDVSHRKQLEYLARNKEWFAEGSKIIITTRDKHLLTQYEHSYEFRVGMLPDDESLKLLNQNAFKKDQPESFTKLSEEVVGYAGGHPMALEVLGSFLCTRQEHEWRRTIDTLTQYLRREILSQLRVSYDELEEEYKTIFLDIACFFNKEAKYKVANMLKICGLDEIVGIKVLAEKSLLSSPQSNLKLLQNARECQNMHDSLEKTRGNYTGMEALPREALEEEASKEYLNMHYLLQEMGRIIVFQESPINAGGRSRLWSWEDINLVLKENKGTKHVQSIILETQQNVVEADWDANCFSKMINLRLLDLSKDRLPSIDELWNLQSLQLCNSKIKKLWKENTVLNKLRIIDMSGSECLSETPDLSGTPNLEELLLNGCRNLIRVDESVGQLKKLVRLGLKGCRMLETLPAQLETDNLRGLILKGCFALVKLPDFGQNMTNLYFLDVSDTGITQIPSTISNLIGLKILDVWNCNNLESLPADLPPHLNVCANNSPKLKDAIAQLNLCAPLVPMRPVDLQGPIHIFVEFEAGATTLEWFKCSEYWWGKDPSSGEFATITADIPSKVVADSNEQCWGIAVCLFLKSKSQASQRSYIVWSFQNGCHSDDKTKMDGNLEPDDDCVVYVGFYPLDNKKRREASQLHLSLSILTTSTARDLHDWEIRGCWWRLVRKVKFDKWREDDGAASPSGHGSSNSERGESGHGVTERRGKRKYEEIL 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00048 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 448 IPR027417 -
Pral3188g00048 1017 SUPERFAMILY L domain-like 599 791 - -
Pral3188g00048 1017 Gene3D Ribonuclease Inhibitor 561 811 IPR032675 -
Pral3188g00048 1017 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 162 IPR035897 -
Pral3188g00048 1017 SMART till_3 28 159 IPR000157 GO:0007165
Pral3188g00048 1017 MobiDBLite consensus disorder prediction 981 1017 - -
Pral3188g00048 1017 PRINTS Disease resistance protein signature 762 778 - -
Pral3188g00048 1017 PRINTS Disease resistance protein signature 389 403 - -
Pral3188g00048 1017 PRINTS Disease resistance protein signature 219 234 - -
Pral3188g00048 1017 PRINTS Disease resistance protein signature 297 311 - -
Pral3188g00048 1017 ProSiteProfiles Leucine-rich repeat profile. 607 628 IPR001611 GO:0005515
Pral3188g00048 1017 ProSiteProfiles TIR domain profile. 27 184 IPR000157 GO:0007165
Pral3188g00048 1017 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 793 IPR044974 GO:0006952
Pral3188g00048 1017 Gene3D - 26 183 IPR035897 -
Pral3188g00048 1017 Gene3D - 184 351 IPR027417 -
Pral3188g00048 1017 Pfam NB-ARC domain 204 437 IPR002182 GO:0043531
Pral3188g00048 1017 Pfam TIR domain 29 190 IPR000157 GO:0007165
Pral3188g00048 1017 MobiDBLite consensus disorder prediction 1 23 - -
Pral3188g00048 1017 Gene3D - 355 438 IPR042197 -
Pral3188g00048 1017 MobiDBLite consensus disorder prediction 1000 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00048 Pral-Chr3188 911929 918896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00048 29 785 WRKY Transcription Factor Family AT4G12020 29.800 6.45e-81 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00048 - - pcin:129302222 821.617