Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00045 ATGAGGGAGGTTTCTAAAAGGCACGACTTAGCTTCCATACAAAAGATGCTTCTTCTTAATCTTGGACTGATTGCACAAGATATAGATGATCCTTGTGAGGGATCAGGGATAATACGACGTCTTTTATGCAATAAAAAGGTTCTTATTATCCTCGATGGTGTAAATGACAAAAGCCAACTAGAAAATTTAGCTGGGAGTTTAGTATGGTTTGGGCGCGGGAGCAAAATAATAATAACTACTAGAGATGAAGGCTTGTTGACAATAGTGGATGGACGGTGTGAAATATATAAAGTTGGAACATTAGATCCAGATGAATCCTTTGAGCTCTTCTGTCAGAGAGCATTTGAAAAGAATGAGCCTGAACAAGGTTATTGGGACTTATCAAAAGAAATAATTCAATGCGTCGGTGGAGTTCCTTTGGCACTTGAATTCTTCAGCTCCTTTGTTTCCAACGGATCCCAATCTGAATTGAGAAACGTATTACATCAATACAGGAAACTTTTACCTGTGGACATCTTTGATATACTTCGCATTAGTTACCATGGACTGGAAGAGAAGTGCAAGATGATATTTTTAGATATTGCCTGTTTTTTCAATGGGAGGACAAAATTTGAAGTGACAGATATATTGAAAATATGCTATAACCGTTCAATATATGATGAAATCGAAGTTCTTATTGCAAAATCATTGCTAATTTCCACCGAATTAAATTCAAATTCAAGATATAATGCAGAACGTGAAGATCTGCAAGATAGGATCCAAAAGATGAGAAGCGATATTTTCTTGCCAACATCTATGTATCATAAATTGATTGATGAGGCTTCACGAGGATCCCTGCGTATGTTTTATTTTGTTGAAGAGATGGGAAGGAACATTGTTTATGATGAATCTCCAAGTGATCCTGGTAGTCGCAGCAGATTGTGGCATATAGAGGACATTGATCGTGTGTTGAAAAGAAATGAGGGAACGGAATACATCCAGAGTATAGTAGTTTGGGATCTAAATCACGCATTTGAAGTAAAATGGCACCCAGAGTGCTTCTCAAAGATGCAGAATCTTAGGTTACTTGACTTAAGCAGTGTTCATCTTGCCCATAATCTCAATCATCTTCCACGTGCATTGAAATTTCTAAGATGGGATTTTTATGCTTTGAAACATCTACCATCAATTGATCTACTACATGATCTTGAAAGCCTTCAATTGCGTAGCAGCAACATCAGGAGACTCTGGAATGGAGCGCCGGAATTGAATAAGCTGAGAACCATTGATCTAAGCAATTCTTATTATCTAAGAGAAACTCCAGATTTCAGTGGAACTCCAAACCTTGAAAAGTTGTTTTTCAATGATTGCGAAAGCGTTATTCACATTCATGAATCTGTTGGACAACTGAAGAAACTAGTTGAGTTGAGTTTGAGACGTTGTACAAATCTTAAATCTCTTCCAACTCCCTTGGATATGGATAATCTGGAGGTTTTTATTCTGGATGGATGTTTCAACCTTGAGAAGCTCCCTGAATTTAGTAAAGGAATGAGAAGGCTATACTTCTTGGATGTGAGGAGCACTAAGATCACCGAGATTCCCTCATCCATAATTAATTTAGAAAATCTGAAATATTTGGACTTGAGTTGGTGCTGGGAACTTCAGTCAATACCGGAGCTTCCTCCAAACTCAATTATTCGTGCAGAAACGGGATCCACATTAGATCTACAACATCTCGTTGAATTGCGTGTCTCTAAGCATCCCATTCACCTTGTTATTGACTCGAAAGTGAAGGAAGTAATCCCGCCGTGGTTTGAACAACAGGAACATCGTTATAGTAAGGATGCCTCGGGTGAAGTAGTAACCATAACAGCAGACGTAGCTAGTGATGACTTGGCAAATTCTGAGGGAATTGCTGTGTACATTATCTTCGAATGCTTATCTGATGAGGAAGCATGGACAGGTTTCGCTATAAATTGGAAGTTCGAAGATGACCCCCATAATACCAATGATAAGAAAAAAGGTGGTCGACCACAGCATCGAGCACGTGCAGATGCAAGCAGCCAAGTTGATTCAACAGCTAAGATTAAGTGTCGAGTTTACAGAGGATTTTTTCCCATTGATAAGGAGAAGTGCCGACAGCATCCAAGTGGTGTGGGCAGCCAAGTCGATTTAACACTTTGTTTCCCAACAACGAATATTGGGAAAGTGATTATTCATTCTGAGGAAACAAGTTTTGGGGACTTTGAAATAGTGGATTGTGGGTGGCGGTTGGTGTGTAAGCGAGATTTGGATGCAAGTAGCGCAAGCATCAGGCATGAAGTAGAAATCGCTGAATGTTGGCAGCCAAAAAAACAAAAAGAAATTGTTGAAGACATTCCAGCGCAGGGGGAAGAAATTGCTGAGGACAGTGCAAAATTGGTAGGAAAGAAATTAGATGATGAGATACCATCTAATTTTGAACATTTAGTTGGAGACACTCAATCAAAGGTCGATGAGATAATCTCCCTTTTAAAGATGGAATTGGATAATGATCCACGCTTCATAAGGATATCGGGCGAGAGTGGCATAGGAAAGACAACTCTTGCTCGACTTGTTTATGATGCAATCCAAAGCAAATTTGATGCTACTTGTTTTCTTGAAAATGTAAGGGAGGATTCAGAAAGGTTTGGCATAGTTTCCTTACAAAAGAAGCTTCTTTCAGAGCTTGGATTAGGAGAACGCGATGTAAGTGATTTTTCTGAAGGTGCAAAGATAATAAGAAAATTTTTATGCCACAAAAAGGTTCTTATTATTCTCGATGATGTCAGTGAAAAAAGCCAACTAGAAAATTTAGCAGGAAATAAGGAATGGTTTGGTGCAGGGAGTAAAATAGTAATAATTACTACGGGGAACATGTCGACATTGGATGAACAGCCTGAAGAGTGTCAAGTTGGAAGATTACGTCCTGATGAATCCCTTCAGCTCTTACATCAGGAAGCTTTTAAAAAGGATAAGCCCGAACAAGTTTATTTGGATTTGTCAGAAGAATTAGTTAAATATGTATGTGGACTTCCTTTGGTACTTAAAGTCTTGGGGTCATTTCTTTTCCAAAAAAAAGAATATGAATGGAGAAATGCATCAGAAAGGTTGAGGCAAAATTCACCCATTGATATCTCTAGTGCACTTCGCATAAGTTATGATGAATTAGAAGATGAAGAGTGCAAACGAATATTTTTAGATATTGCATGTTTTTTTAACAGGGAGGTCAAATTCAAGGTGATAAATATGTTGGAATCATTATGTGGTCCTCATTCAGTGAGTGGAATTAAAGTTCTAATTGAAAAATCTATGCTGAATTTCATTCATTCAAATTCAGATATAAGGCAAACTGCAAAAGAAGATCAGGATATGCTTGATAAGGTTCAAAAGATGAGAAGGGATATTTTTTTGCCTACACATTTGTATGATTGGTTGCTGCAAGAGGCTTCAAAAGAATATCTATATATGCATGATTTGCTTCAGACGATGGGAAGGGAGATCATTTATCAAGAATCTCCAAATGCTGGCAGACGTAGTCGATTGTGGTCACGAGATGATATTGATAATGTATTGAAAGAAAATGAGGGAACCGGAAACGTTCAAAGTATAGTTTTGTATATACAACAACATTTTGACGCAGAGTGGCACCCTGATTGTTTTTCAAACATGCAAAATCTTACATTACTCGAGTTGAGTAAGGCGCATCTTACACGTAATCTCAATTCTCTTCCAAGTGCGTTGAAAATTATGAGATGGGATTATTATGATTTGGAATCTCTGCCACCGGTTGATCAATCACGTGATCTTGAAAGCCTTCAATTGCGCTGTAGCAAAATCACAAGACTCTGGGAGGGAGCACCGGAATTGCATAAGCTGAGGACCATTGATCTGAGCCATTCTGATGATCTAAGGGAAACTCCAGATTTCAGTGGAACTCCAAATCTTGAAGAGCTGCTGCTCAATGGATGCAGAAAGCTAGTCAAGGTTCATGAATCTGCTGGACAATTGAAGAATCTGGTTAAGTTGACTTTGAAAGAGTGTAGAAGACTTGAAATTCTTCCCACTAAATTGGAAACGGATAAGCTAGCGGAGTTTATACTAAATGGATGCTTAAAGCTTGAGAAACTCCCCGAGTTTAGTGAAAATATGGGAAGTCTATATTTCGTTGATGTGAAGGGCACTGATATCACCGAAATTCCTCAGTCCATAATTCACTTGACAATTCTCAAATACTTAGACTTGACATATTGCAGCAGACTGAAGTCAATGCCCGAGCTCCCTCCAAATGTAATTATATATGCAAGCAACTGTGACTTGTTGGAACCCACATCTGCTCTACGGCATCTCCATGCATCTTGTTCTCCAAAGGGTCCCATTCACCTTTTCTATGACTTCCAACTGTGGACAAGAATCCCGACATGGTTTGAACGGTGGGAATATTGCTGGGGTAAGGATACCACAGGTGAATTTGTAACCATAACAGCAGACTTACCTTCCAACGTTGTTGCAGGTTCTAACAAAGAACGCTGGGGAATTGCTGTATGCGTTGTTTTTCAATTCTTATCTCAAGCATGGCTTGGTTTCTCCATAGACTGGAAGTTCAAAGACTGCCATCCCAAGAAAACCAAAATACATGGTACTCCACTATATTATGTGCATGATTGTCGAGTTTATGTGGGATTTTATCCTTTCGACGCAAATGATAACTACAGACAAGATCCAAGTCCAATAAAAGGTGGCCAACTTGATTTGACACTCGATTTTCCAAAAGCCAACATCATTAATGGTCTCCATGATTTGAAAATAATGGGATGTGGGTGGCGTCTGGCATGTAAGAAGGATTTTGATGAATGGAGTGAAAGTAGAGCGCCATCACCTCCAAGACTTGGCTTCTTTAATAGGTAA 4905 0.3888 MREVSKRHDLASIQKMLLLNLGLIAQDIDDPCEGSGIIRRLLCNKKVLIILDGVNDKSQLENLAGSLVWFGRGSKIIITTRDEGLLTIVDGRCEIYKVGTLDPDESFELFCQRAFEKNEPEQGYWDLSKEIIQCVGGVPLALEFFSSFVSNGSQSELRNVLHQYRKLLPVDIFDILRISYHGLEEKCKMIFLDIACFFNGRTKFEVTDILKICYNRSIYDEIEVLIAKSLLISTELNSNSRYNAEREDLQDRIQKMRSDIFLPTSMYHKLIDEASRGSLRMFYFVEEMGRNIVYDESPSDPGSRSRLWHIEDIDRVLKRNEGTEYIQSIVVWDLNHAFEVKWHPECFSKMQNLRLLDLSSVHLAHNLNHLPRALKFLRWDFYALKHLPSIDLLHDLESLQLRSSNIRRLWNGAPELNKLRTIDLSNSYYLRETPDFSGTPNLEKLFFNDCESVIHIHESVGQLKKLVELSLRRCTNLKSLPTPLDMDNLEVFILDGCFNLEKLPEFSKGMRRLYFLDVRSTKITEIPSSIINLENLKYLDLSWCWELQSIPELPPNSIIRAETGSTLDLQHLVELRVSKHPIHLVIDSKVKEVIPPWFEQQEHRYSKDASGEVVTITADVASDDLANSEGIAVYIIFECLSDEEAWTGFAINWKFEDDPHNTNDKKKGGRPQHRARADASSQVDSTAKIKCRVYRGFFPIDKEKCRQHPSGVGSQVDLTLCFPTTNIGKVIIHSEETSFGDFEIVDCGWRLVCKRDLDASSASIRHEVEIAECWQPKKQKEIVEDIPAQGEEIAEDSAKLVGKKLDDEIPSNFEHLVGDTQSKVDEIISLLKMELDNDPRFIRISGESGIGKTTLARLVYDAIQSKFDATCFLENVREDSERFGIVSLQKKLLSELGLGERDVSDFSEGAKIIRKFLCHKKVLIILDDVSEKSQLENLAGNKEWFGAGSKIVIITTGNMSTLDEQPEECQVGRLRPDESLQLLHQEAFKKDKPEQVYLDLSEELVKYVCGLPLVLKVLGSFLFQKKEYEWRNASERLRQNSPIDISSALRISYDELEDEECKRIFLDIACFFNREVKFKVINMLESLCGPHSVSGIKVLIEKSMLNFIHSNSDIRQTAKEDQDMLDKVQKMRRDIFLPTHLYDWLLQEASKEYLYMHDLLQTMGREIIYQESPNAGRRSRLWSRDDIDNVLKENEGTGNVQSIVLYIQQHFDAEWHPDCFSNMQNLTLLELSKAHLTRNLNSLPSALKIMRWDYYDLESLPPVDQSRDLESLQLRCSKITRLWEGAPELHKLRTIDLSHSDDLRETPDFSGTPNLEELLLNGCRKLVKVHESAGQLKNLVKLTLKECRRLEILPTKLETDKLAEFILNGCLKLEKLPEFSENMGSLYFVDVKGTDITEIPQSIIHLTILKYLDLTYCSRLKSMPELPPNVIIYASNCDLLEPTSALRHLHASCSPKGPIHLFYDFQLWTRIPTWFERWEYCWGKDTTGEFVTITADLPSNVVAGSNKERWGIAVCVVFQFLSQAWLGFSIDWKFKDCHPKKTKIHGTPLYYVHDCRVYVGFYPFDANDNYRQDPSPIKGGQLDLTLDFPKANIINGLHDLKIMGCGWRLACKKDFDEWSESRAPSPPRLGFFNR 1634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00045 1634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 683 1437 IPR044974 GO:0006952
Pral3188g00045 1634 Pfam NB-ARC domain 4 159 IPR002182 GO:0043531
Pral3188g00045 1634 Pfam NB-ARC domain 821 1048 IPR002182 GO:0043531
Pral3188g00045 1634 MobiDBLite consensus disorder prediction 660 674 - -
Pral3188g00045 1634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 820 1068 IPR027417 -
Pral3188g00045 1634 PRINTS Disease resistance protein signature 841 856 - -
Pral3188g00045 1634 PRINTS Disease resistance protein signature 1008 1022 - -
Pral3188g00045 1634 PRINTS Disease resistance protein signature 916 930 - -
Pral3188g00045 1634 PRINTS Disease resistance protein signature 1404 1420 - -
Pral3188g00045 1634 SUPERFAMILY "Winged helix" DNA-binding domain 171 263 IPR036390 -
Pral3188g00045 1634 SUPERFAMILY L domain-like 1205 1437 - -
Pral3188g00045 1634 SUPERFAMILY L domain-like 325 582 - -
Pral3188g00045 1634 MobiDBLite consensus disorder prediction 660 682 - -
Pral3188g00045 1634 Coils Coil 239 259 - -
Pral3188g00045 1634 Gene3D - 973 1057 IPR042197 -
Pral3188g00045 1634 Gene3D - 100 184 IPR042197 -
Pral3188g00045 1634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 194 IPR027417 -
Pral3188g00045 1634 Gene3D - 2 97 IPR027417 -
Pral3188g00045 1634 Gene3D - 799 970 IPR027417 -
Pral3188g00045 1634 Gene3D Ribonuclease Inhibitor 313 598 IPR032675 -
Pral3188g00045 1634 Gene3D Ribonuclease Inhibitor 1361 1453 IPR032675 -
Pral3188g00045 1634 Gene3D Ribonuclease Inhibitor 1205 1360 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00045 Pral-Chr3188 844417 858758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00045 35 575 WRKY Transcription Factor Family AT4G12020 32.321 2.89e-58 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00045 - - pcin:129302222 805.438