Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00027 ATGAGTTTCTCCGGTTCTTCCACGGAGGCTAAGCGCCGAACAGTTCGTAATCTCGTCGGAAAATTGAGTTCTGTTTCCGAGAAGACTCGAGTGGATGCTCTTTGTCAGCTTCGTCTTATGACGAAGCTAGATTCAGAAATTCGTCCTCTGATTGTTGATTCTGGTGCGATTCCTTACTTAGCAGAAACACTTTATTCGTCTACGCCTGATTCTCAGGAGAACGCCGCGGCGACGCTTTTGAATATCTCGATATCTTGTAAAGAGGCTCTCGTGTCCACGCGCGGTGTCCTCGACGCGATTTCACACGTTTTGTCGCATCATCGAGATACGTCTTCTCCCACCGCCGTTCAATCCTCCGCCGCCACGTTGCACAGTCTCCTCGTTGTTGATGAGTACCGGCCGATAATCGGATCGAAACGTGACATCGTGTACGCGCTTGTGGACATAATCAAGAGCCTCAATTCGCCGTCTCGGTCGATCAAGGACGCTCTCAAGGCCTTGTTCGGAATCTCGCTGTATCCTCTTAATCGAAGCACGATGATCCATCTAGGTGCGGTTGCGCCGTTGTTTTCTCTAGTTGTGAAGGATGGAAGAATCGGGATCGTGGAGGATTCCACGGCGGTGATCGCGCAAATCGCCGGTTGCGAGGAGAGCGAAGAGGCGTTTCGGAAGGTATCAGGAATCGGAGTGTTGGTAGATCTAATGGATTCAGCGACTGGGTCAAGTATGAGAACGAAGGAGAATGCCGTGTCTGCGCTGTTGAATCTGGTGATGTGCGGAGGGGACAAGGTTGCGGCGGATGTGAGAGAGAAAGCCGAGACGGCCACGGACGGCCTCGCCGACGTGGCGGAGAACGGCAGCGCCAAGGGGAAGAACAAGGCGGTGACGTTGTTGACGGTATTGTTTGATGGATTTGGAAGCAATGAGAATGGATTGAGGGATCAAACTTCATGA 954 0.521 MSFSGSSTEAKRRTVRNLVGKLSSVSEKTRVDALCQLRLMTKLDSEIRPLIVDSGAIPYLAETLYSSTPDSQENAAATLLNISISCKEALVSTRGVLDAISHVLSHHRDTSSPTAVQSSAATLHSLLVVDEYRPIIGSKRDIVYALVDIIKSLNSPSRSIKDALKALFGISLYPLNRSTMIHLGAVAPLFSLVVKDGRIGIVEDSTAVIAQIAGCEESEEAFRKVSGIGVLVDLMDSATGSSMRTKENAVSALLNLVMCGGDKVAADVREKAETATDGLADVAENGSAKGKNKAVTLLTVLFDGFGSNENGLRDQTS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00027 317 PANTHER U BOX DOMAIN-CONTAINING 14 299 - -
Pral3188g00027 317 SUPERFAMILY ARM repeat 14 302 IPR016024 -
Pral3188g00027 317 SMART arm_5 173 214 IPR000225 GO:0005515
Pral3188g00027 317 SMART arm_5 44 84 IPR000225 GO:0005515
Pral3188g00027 317 SMART arm_5 215 258 IPR000225 GO:0005515
Pral3188g00027 317 FunFam ARM repeat superfamily protein 9 306 - -
Pral3188g00027 317 Pfam Armadillo/beta-catenin-like repeat 44 83 IPR000225 GO:0005515
Pral3188g00027 317 Gene3D - 3 306 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00027 Pral-Chr3188 517304 518511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00027 15 301 U-box Gene Family AT2G23140 34.375 3.50e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00027 - - qsa:O6P43_001485 436.417