Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00026 ATGACGAAGCTAGATTCAGAAATTCGTCCTCTGATTGTTGATTCTGGTGCGATTCCTTACTTAGCAGAAACACTTTATTCGTCTACGCCTGATTCTCAGGAGAACGCCGCGGCGACGCTTTTGAATATCTCGATATCTTGTAAAGAGGCTCTCGTGTCCACGCGCGGTGTCCTCGACGCGATTTCACACGTTTTGTCGCATCATCGAGATACGTCTTCTCCCACCGCCGTTCAATCCTCCGCCGCCACGTTGCACAGTCTCCTCGTTGTTGATGAGTACCGGCCGATAATCGGATCGAAACGTGACATCGTGTACGCGCTTGTGGACATAATCAAGAGCCTCAATTCGCCGTCTCGGTCGATCAAGGACGCTCTCAAGGCCTTGTTCGGAATCTCGCTGTATCCTCTTAATCGAAGCACGATGATCCATCTAGGTGCGGTTGCGCCGTTGTTTTCTCTAGTTGTGAAGGATGGAAGAATCGGGATCGTGGAGGATTCCACGGCGGTGATCGCGCAAATCGCCGGTTGCGAGGAGAGCGAAGAGGCGTTTCGGAAGGTATCAGGAATCGGAGTGTTGGTAGATCTAATGGATTCAGCGACTGGGTCAAGTATGAGAACGAAGGAGAATGCCGTGTCTGCGCTGTTGAATCTGGTGATGTGCGGAGGGGACAAGGTTGCGGCGGATGTGAGAGAGAAAGCCGAGACGGCCACGGACGGCCTCGCCGACGTGGCGGAGAACGGCAGCGCCAAGGGGAAGAACAAGGCGGTGACGTTGTTGACGGTATTGTTTGATGGATTTGGAAGCAATGAGAATGGATTGAGGGATCAAACTTCATGA 837 0.5257 MTKLDSEIRPLIVDSGAIPYLAETLYSSTPDSQENAAATLLNISISCKEALVSTRGVLDAISHVLSHHRDTSSPTAVQSSAATLHSLLVVDEYRPIIGSKRDIVYALVDIIKSLNSPSRSIKDALKALFGISLYPLNRSTMIHLGAVAPLFSLVVKDGRIGIVEDSTAVIAQIAGCEESEEAFRKVSGIGVLVDLMDSATGSSMRTKENAVSALLNLVMCGGDKVAADVREKAETATDGLADVAENGSAKGKNKAVTLLTVLFDGFGSNENGLRDQTS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00026 278 PANTHER U BOX DOMAIN-CONTAINING 5 260 - -
Pral3188g00026 278 Pfam Armadillo/beta-catenin-like repeat 5 44 IPR000225 GO:0005515
Pral3188g00026 278 SUPERFAMILY ARM repeat 3 263 IPR016024 -
Pral3188g00026 278 SMART arm_5 176 219 IPR000225 GO:0005515
Pral3188g00026 278 SMART arm_5 134 175 IPR000225 GO:0005515
Pral3188g00026 278 SMART arm_5 5 45 IPR000225 GO:0005515
Pral3188g00026 278 FunFam ARM repeat superfamily protein 1 267 - -
Pral3188g00026 278 Gene3D - 2 268 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00026 Pral-Chr3188 517304 527123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00026 1 262 U-box Gene Family AT2G23140 33.460 6.20e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00026 - - qsa:O6P43_001485 392.119