Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00020 ATGGAGGGCATCGGTGCGGAAATTGCAAAGAATGAGGTCCAAAGTTTAGTAAATTTTGTCAAAGGCGAAGTTCGATATTTATGTTGTTTTCACAATTATGCTGCAACATTTGATAAGAAAAAGGAAGAACTAAAAGCAAAGCTCCTAGATGTAAATAGAATTATAGAAAAAGCCAGAGGTGTTTCTAGGGTTACAGATGAAGCACTACAATGGACACGGGAAGCTGGAAGTCTCATTGAGTGTGACACTAGAAAAGAGAAATGCTTTAATGATAAGTGTCTTAATTGCTGGCAACAATATCGGAAAGGCAAAGACATGGAGGAGAAGACACAACAGATTGACAGACTTTTGAAAAGATGTAACTTTAACATAGTGGCAGGGGCAGCTGATTTTCCTAGCATAAAATACCAATCTTCACAGGATTTCATGCATTTTGAGAGCAGAAAGTCACAGTTTCAAGATCTAAAAAAGGCACTAGAAGATGAAAATTGCAATATGATCGGATTGCATGGCACTGGGGGAACAGGCAAAACCTCAATGGCATTACAAGTGGCTGCTGAACTCGGAGGATCCAAATTTGACAAAGTCATCTTTCTTGTTGTCTCTCAGCTTCTAGATTTCAAAAAGATTCAACATGATTTGGCAAAAGATCTTGATTTGGAATTAAAGGAAGGAAAGGAAGAAGAACATGCAAAGAAAATATGGTCCAAAATCACTAATATGAAAGAGAGGCTTCTTATAATCCTAGATGATGTATGGGAAGAGCTTGATCTTATACAAAAGTTGGGAATCCCATCTAGTCACCAACACATGGATTGCAGTGTATTAATAACCACACGTAATCCACATGTTTGTTCATTAATGAAGTGCCAAAAATTGATTCAAGTTCAGATATTGACTGACAAAGATGCATTGGATCTTTTCCTAGCACAGGCTAGCATTAATGGTTCCTCTAGTGGTTTGAGGGTTGTGGCAGAAAAAATTGTGGAGAAATGTGGAGGAGTACCAGTTGCAATTGTAGCAATAGCAAGAGCATTAAAAAATCGGCCTTTATTTGCTTGGACAGATGCTTTGAAAGCTTTGGAATCCAATGATATTAAGCAAGGTTTGACAGAGGCTTATAAATGCCTGAAATTGAGCTATGATTACTTGAAAAATGAAAAAGCCAAAGAAATATTTGTCATATCTTCTTTGTTCCCAGAAGATTTTCAAATTTCTATACAAATTTTAAGCAAATTTGCTATAGGATTGGGCCTTTTTGGAGAGGTGGACAGGTACCATTCAGTAAGAAGCAAAGTGGGTGAAGCCATACTAGAAGTGATCGATTCTTCTTTATTGTTGACTGACAATGAAGAATGCATGAAGATGCATGATTTGGTTCGTGAAGTAGCTTTATGGATAAGAGAGAAAGATACTCAATGGATCATGGATCTTAAAAAGCCTATAAAACAGAACTTGCGGTATTTGGTTTGGAAGAATGATGGTTTTCCTGGTAAATTCGATGGAAAGAACCTAGAAATTTTAATGATATTTCTAGGTGGTTCAAAGAATTTGGAAGTACCTGATACATTTTTTATAGAGATGATGAGGCTGAAAGTTCTGTATTTAGCAAGTGATGAACAAATTTCAGTTCCAACACTAATATATTCATTTCGATCATTAAAGGATGTTCGGACTCTCAACCTATTGAATTTGAAATTAGGCGACATCTCCTTGCTAGGAAACTTACATAGGCTTGAGAGTCTTTGGTTATTTGATTGTTCAATCATTGAGCTACCAAAAGAAATTTTAAACCTAAACAAGTTGAGGTTGTTGGAGGTAGATAAATGTGAAATTGAAAAGAACAATCCTTTTGAAGTGATTGGAAAATGCTCCCAATTGGAAGAATTGAGCTTTGTAGGAAATCAGTTTGACATAAAAGAAGCATGTGTTGTTTTTGAAAATTTATCTCCTTCTACGTTACATAGATATAAAATATCTTGGTGGAATCTTGAAAGGATTCGGGGAATAGAAAAGTATGGTTTCATATCAAGATGGTTTTACCCATGTGATTGGCGGAATCTAATTTCAGAGGCAACATTCAAGCAATTTGTACGAACTGCCGAGCTTCTTATATTAGGAGGGTATAAAGAAACAAGATGGAAGAATCTTGTCCCAGATATTGTTCCAGTGGAAGAAGGAGGCATGAATGATTTAATTGTTCTTCGTTTGTATTCTTGGCCTGACATGCAGTGCCTCATTGACAGTAAGAATCATGAAACTAATGTGACTACTTTCTCCAAGTTAGTTGAACTAAATCTCAAAGAGATGGATGTTGAAGATTTATATCGAGGTTCTTTGCCGTCTGGCTTTCTAGAGCAATTAGAGACTATGAGGTTGACGAAGTGCCAAAAATTGAGAAATATATCATTTGATGGCAAGTTGAGCCTGTGTCATCTTAAGGTCATGGAATTGAATGCTTGTCCAAAATTGACATCAATTTTTCAATCATTCACCGCTCAGAGTCTCACGCAATTGGAAACACTAAGTATTGAGAATTGTGATTCCCTAGAACACATCATAGCATATAAGAGCTCGGAAGGAGAAATAGCGGGTGGTGATAATGAAGAGAAGAGTTATGAGTCATTGTTCCCAAAATTAAGAACTCTTCAAATTAAACGATGTGGAAGATTACGAATGATCTTGCTAGTTCTTTTCAGCGGAGCTCTTGCATCCTTGGAAGAGATAACGATAAGTGACTGTGAGCAGCTGAGTTATATATTTGATAAGTTCCAAAATGGAGACCATACTATGCTGCCCTCACTAAAGAAAATGGAACTTTCTCAAGTACCAAGTTTCATCAGCATTTTTCGAGAATATCACAAATCCGTGTCTTTGTCAATGCAAAAGCCATCACCTCCAATTTTGAGAACAAAGACATCTGCATTCTCTTGGGCTCAAATGTGTTGTTTTGGGCATAAATCGAGTGAAGAGACCAACGTCGTCGTGTGTAAGGACAGAGTTCCGAACGACGCAACACAACAGGGATCATCATTTGCATCCAAGACATGGTTTGAAACTTCTGGAATCATTCTGAGACAACTATATTTCAATGTCGGTCATATCAAGAGGTTGAAATTGGCACAAGTGTCTTTAAATTCAGTGTCATTATTTACTTTATCCATGGCCTCGTTGATATTGTGGGAAGAGCTGACGGTTGAAGGATGTGATGGGTTGAAGGATGTGATAACAATGGAGGAAGATGATTATAATGATCAGATGATGATGAGTTGCCACTCTGTTTTTCCGAAGTTAGAGAAACTAGAAATCTTGGAGTGCAAGGACTTGCAATTTTTATTTCCATCTTCAATATCTATAGGACTTCAAAATTTGAAGTCTTTGATGGTCCGGAATGCTCCTGAGTTAAAATATGTTGCTGGAAAATACCATTATGTGGGTCATCCATCAAATCAAAATCATAACATTGAGCTTCACTTTGATCTCCCGAATTTAGTGTCACTCTGCCTTGAAGATGTACCGATGCTTATCAGTATTTTTCCAATGAATTATAACTTGGCATGGCCTTCTCTAGAGGATGCTACTTTGGAGAATCGCAACGTTGAATCTTTTACTGATGATTTGCTGGTTTGCCTTGAAGGACAACCAAACAAGGAAACCATCAAGGAATCAGATGCATCTGAAAATGTGATGCCTCCTACTCGAGCAACTCGGTGCCTTTCAGTACAATCATTGGATAATATTAAAAAGATGACTCTCTGTAATTTTTCCAAATCAAAGACATTGTTTACTCTACCAATGGCCTCCATGGTTATGTGGGAAAATTTGACAATCAGAAGATGTGAGCAACTAAAGCACATTGTGGCGGATGAGGGAGAAGTTGGAGCTCTCATGAATCACAGATCCATCTTTCCAAAGTTGAAAGAGTTAGAGGTTAAAAATTGTGATGCACTGGAATATCTATTTCCAGCATATGCTTTCAGATCACCCACACATTTGAAATCTCTAGATATTTGTAATGCTTCTGAGTTGAAATATGTGTTTGGAACAAGCCATCATGAGAATCAAAATATCCAAACTTACATTGATTTCCCTGTTCTGGAATGGTTAAATTTTGAATCCCTACCAAGCCTCTTGAGCATTTATCCTAAAAATTATTATTTGAGAGGCCTATCTTCTCTAAATTATTTTTTGTTAGGGACTCCAGAGTTTAATATTACATCTTTAACTGATTTCACGGTTCATGCACTTGGAGGACAACAGGATTCCACCCCTGCACAGGCAGTGCAGATGCTCTTGCAATCCTTACGATTTATTGTATTTCGTGAATCTAAAATAGAAGAGATTTTCAATTTAACACATATGGAAACAGAGAAAAAAGGGGAAGGACGTGAACCACTGACATCAACCTTAAATTGGTTGAAGTTGGAAACTTTAAGTGAGTTGAAGAATATATGTGTGGGCCCCAAATATATGCTTAGCCTCAACAACATTTCACGATTGATAATCAGAGGATGCAACAAGCTTAAAGTTATCTTCTCGAACTCTATACTGAAGAGCCTACCGAAGTTGTGGCGGCTGAAGATATTATCATGCAAGGAGTTAACTCACATCATTGGGGAAAATGCTGATGATGATCATTTGTGTCATCAACCATGCTTTCCAGACCTATTTACAAGTTTTGGATATAAAAGAATCTTCCAAACTTGA 4707 0.3711 MEGIGAEIAKNEVQSLVNFVKGEVRYLCCFHNYAATFDKKKEELKAKLLDVNRIIEKARGVSRVTDEALQWTREAGSLIECDTRKEKCFNDKCLNCWQQYRKGKDMEEKTQQIDRLLKRCNFNIVAGAADFPSIKYQSSQDFMHFESRKSQFQDLKKALEDENCNMIGLHGTGGTGKTSMALQVAAELGGSKFDKVIFLVVSQLLDFKKIQHDLAKDLDLELKEGKEEEHAKKIWSKITNMKERLLIILDDVWEELDLIQKLGIPSSHQHMDCSVLITTRNPHVCSLMKCQKLIQVQILTDKDALDLFLAQASINGSSSGLRVVAEKIVEKCGGVPVAIVAIARALKNRPLFAWTDALKALESNDIKQGLTEAYKCLKLSYDYLKNEKAKEIFVISSLFPEDFQISIQILSKFAIGLGLFGEVDRYHSVRSKVGEAILEVIDSSLLLTDNEECMKMHDLVREVALWIREKDTQWIMDLKKPIKQNLRYLVWKNDGFPGKFDGKNLEILMIFLGGSKNLEVPDTFFIEMMRLKVLYLASDEQISVPTLIYSFRSLKDVRTLNLLNLKLGDISLLGNLHRLESLWLFDCSIIELPKEILNLNKLRLLEVDKCEIEKNNPFEVIGKCSQLEELSFVGNQFDIKEACVVFENLSPSTLHRYKISWWNLERIRGIEKYGFISRWFYPCDWRNLISEATFKQFVRTAELLILGGYKETRWKNLVPDIVPVEEGGMNDLIVLRLYSWPDMQCLIDSKNHETNVTTFSKLVELNLKEMDVEDLYRGSLPSGFLEQLETMRLTKCQKLRNISFDGKLSLCHLKVMELNACPKLTSIFQSFTAQSLTQLETLSIENCDSLEHIIAYKSSEGEIAGGDNEEKSYESLFPKLRTLQIKRCGRLRMILLVLFSGALASLEEITISDCEQLSYIFDKFQNGDHTMLPSLKKMELSQVPSFISIFREYHKSVSLSMQKPSPPILRTKTSAFSWAQMCCFGHKSSEETNVVVCKDRVPNDATQQGSSFASKTWFETSGIILRQLYFNVGHIKRLKLAQVSLNSVSLFTLSMASLILWEELTVEGCDGLKDVITMEEDDYNDQMMMSCHSVFPKLEKLEILECKDLQFLFPSSISIGLQNLKSLMVRNAPELKYVAGKYHYVGHPSNQNHNIELHFDLPNLVSLCLEDVPMLISIFPMNYNLAWPSLEDATLENRNVESFTDDLLVCLEGQPNKETIKESDASENVMPPTRATRCLSVQSLDNIKKMTLCNFSKSKTLFTLPMASMVMWENLTIRRCEQLKHIVADEGEVGALMNHRSIFPKLKELEVKNCDALEYLFPAYAFRSPTHLKSLDICNASELKYVFGTSHHENQNIQTYIDFPVLEWLNFESLPSLLSIYPKNYYLRGLSSLNYFLLGTPEFNITSLTDFTVHALGGQQDSTPAQAVQMLLQSLRFIVFRESKIEEIFNLTHMETEKKGEGREPLTSTLNWLKLETLSELKNICVGPKYMLSLNNISRLIIRGCNKLKVIFSNSILKSLPKLWRLKILSCKELTHIIGENADDDHLCHQPCFPDLFTSFGYKRIFQT 1568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00020 1568 Gene3D Ribonuclease Inhibitor 1031 1548 IPR032675 -
Pral3188g00020 1568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 393 IPR027417 -
Pral3188g00020 1568 PRINTS Disease resistance protein signature 166 181 - -
Pral3188g00020 1568 PRINTS Disease resistance protein signature 834 850 - -
Pral3188g00020 1568 PRINTS Disease resistance protein signature 239 253 - -
Pral3188g00020 1568 PRINTS Disease resistance protein signature 332 346 - -
Pral3188g00020 1568 SUPERFAMILY RNI-like 1029 1386 - -
Pral3188g00020 1568 SUPERFAMILY L domain-like 455 950 - -
Pral3188g00020 1568 Gene3D Ribonuclease Inhibitor 870 963 IPR032675 -
Pral3188g00020 1568 Gene3D Ribonuclease Inhibitor 712 860 IPR032675 -
Pral3188g00020 1568 Gene3D Ribonuclease Inhibitor 471 698 IPR032675 -
Pral3188g00020 1568 Gene3D - 299 385 IPR042197 -
Pral3188g00020 1568 Pfam NB-ARC domain 152 382 IPR002182 GO:0043531
Pral3188g00020 1568 Gene3D - 134 298 IPR027417 -
Pral3188g00020 1568 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1122 1320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00020 Pral-Chr3188 464359 470026 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00020 167 473 WRKY Transcription Factor Family AT5G45050 27.245 1.32e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00020 - - pcin:129313598 1603.96