Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3188g00005 ATGGAGGGCTGCCTCTTTGGCATAGCAAATAACGAAGTCCAAAGTTCGGTGAATCTAGTAAAAAATGAAGCTCAATATTTATGTTGTTTCAACAATTTTGTTGAAAATTTTGATAAAAAAAAGAAAATACTAGCAGCAAAGCATCGGGATGTGAAAAGAGAGTTTCAGAAAGGCAATTTTAAGTCTGAAGCGCAGCAATGGGTAGATGAAGCAGATGATATTATCCATATAGACAGTAAAATAAAGAAGAGATTTCTTGTTGGTCGGTGTCCTAATTGCTGGTGGCAGTACCGAAAAGGCAAGGAGTTAGCAAAGGAGACTCAGCATATTGAAGATCTACTGGGAAGAAGTAACTCCAATATAATAGCTGGTCGAGCAAATATACTGGACATAAAACACCTTCCTTTACAAGATTTTCTTCATTTTAAGAGCAGAGAGTCAAAGTTCCAAGATCTGTGGAAGGCATTACAAGATAACAATTGCAACATGATTGGATTGCGAGGGATAGGGGGAGCGGGCAAAACTTCAATGGCAAAAGAAGTGGCTCATAAGCTGAGAGAATCTAACTTGATTGACAAATTCATCTTTCTCGTTGTCTCCAAGCCTCCTGATTTCAAAAAGACTCGTGAAGAATTTGCAAAAGGTTTAGATTTGAATTTAGAGGAAGTGAAGGAAGAAGAACTCTCAAGTAAAATATTGTCTAGAATCACTAAAATGGACAAAAAGTTGCTTATAACACTAGATGATGTATGGGAAAAATTTGATTTGATAGAAAAGTTGGGGATTCCATCTGACCACAAGGGCTGTACTTTATTGATAATCACACGTAGTTCAAATGTTTGTATGGAAATGGAATGCCGAATGATTGAACTACAGATGTTAAACAACAAAGAGGCATTGAAACTTTTTGAAGCACATGCCAAATTAAATAATTCCTGTCATGGTTTGAAGGGTATGCCAGAAAAATTTGTGGAGCATTGTGGAGGAATACCAGTTGTAATTGTAGCAATAGCTAGAGCATTAAAAAATAAACAGGCACCAATTTGGAAGGATGCTTTGAAAACCTTGGAAGATCGTGCTGTTGATCAGAATTTAGAAGGGGCTTATAAATGCTTGAAGTTAAGCTATGATAACTTGAAAAATCAAAAGTCCAAAGATCTTTTTCTTATATCTTCTTTGTTCCCAGAAGATTACCAAGTTCCTATACAAGTTTTAACCGAAATTGGTATTGGGTTGGGTTCTTTTGGGGAAAATGATAGATACCATTTAGCAAGAAGCGAAGTGCATGAAGCTATAGGGGAACTCATAGATTTCTCTTTATTGTTGCATGGAAGGGATGAATGTGTAGAGATGCATGATTCAATTCGTGAAGTGGCTTTGTGGATAGGAGAGAGAGATATTCAATCTCTCTCAGATTCGAAAATGGCTATGAAAGAGAGTTTGAGATATTTGCTTTGGAAGAATGATGATTTTTCGACTAACTTTAACGGAAGTAAATTGGAGGTTCTATTACTATTTTTAGATGGTTCAAAGGAGTTCAAGGTCTCCGGTGCATTCTTTAAAGAGATGATGAGGCTCAAAGTTTTGGTTTTATTTAATAATAATTATTATTACAAAAGAATTCCAGCTCTATCGTTGATGAATTCACTCCAACCATTGAAGGACATTCGAACACTTATCCTGCAACGTTTGAAGTTAGGTGACATCTGTGCCTTAGGAAACTTGTTGAGTCTCAATACTCTTCGGTTTTTGAGTTGTTCAATCATTGAGTTACCAAGAGAATTTTTGAAACTGAAGAAGCTGGGATCGTTAGAGGTTGAAAGATGTAAAATCAAGAAGAACAATCCTTTTGAAGTGATTGAAAGATGCACCCAGTTAGAAGAGTTAACTTTTGTTGCTAATAGGTGTGACAATGAAGAAAACGATGCAATTTCTCATAATAGATCTTCTCTTACATTACACAGATATTGTATATCTTCTAAGAACCTTTCAGGTTATTTTGAGAAGTATGGTTTCATGTCAAGATGTGTTCAAATAGATGATCCATTAAGTCATTTAGTCTCAGAGACAACATTTAAGCAACTTGTCAAAGGAGCTGAACTTCTCATCTTGGAAGGAGAGGATGCGCCAAGAATATGGAAAAATTTTGTCCTTGATGATATTGTTGCAACAGATGATCGAGGCATGATGAATGATTTGATTGTTCTTCATTTGAGTTCATGTCCTTATATGGAGTTCCTCATAGATACTAAAGATCATGATTCTGGTGTGGCTGGTTTCTGTAATTTGTTTGGATTACATCTCTCTAATGTAGAAGTTGAAGATTTATGTCATGGTCCTCTACCGTCTGGCGTTTGGGAGCAATTAGGGATTATGAAGTTGAATAAGTGTCATAGACTGAAGAGCATATTATCTAATGGCAACTACAACTTATTTCATCTTAAGTCCATGAAACTGGAAGATTGTCCAATGTTAGTATCAGTTTTCCAACCATCCACTGCACGAAGTCTGATGAAGTTGGAAAAATTAACAATTAGGAACTGTAGTGCATTGGAATGCATTCTAGTGAGCGAAGACAGTGATAGTAACCTAAAGAGTTACCATGACTCCTTGTTCCCAAAATTGAAAAAACTTCAAATTGAATTTTGCGACAAATTAAGAAGAATACTGCCAGTCCTATTCGTTGGAGGTCTTGCATCTTTGGAAATGTTGAGTATATATAAATGTGAGCAGCTGGAATACATGTTTGATAAGTTTGAAGAGGGTGAAGATGCTATGCTGCCCTCACTGGAAAAGCTGCAGGTTGTTGGAGTGCCAAATTTCATCGGAATTTTCAGAGAATATTACCAACTGATGAGCCCACCAATGCAGAAGCCATCACCTCCACTTTCAAGACATAATTCCAACAACATAAATCAAAGTCCTGCCAGACGTGTTTTCTCTTGGGTTCAAGCATGTTGTTCTCTCAATAAATCGAGGCCCGCCAGTGAAGATACCAAAATTACTGTTCCTGAACAAAGACCGCATGACCACAGAGTCCCACAGGATAACTAG 3054 0.368 MEGCLFGIANNEVQSSVNLVKNEAQYLCCFNNFVENFDKKKKILAAKHRDVKREFQKGNFKSEAQQWVDEADDIIHIDSKIKKRFLVGRCPNCWWQYRKGKELAKETQHIEDLLGRSNSNIIAGRANILDIKHLPLQDFLHFKSRESKFQDLWKALQDNNCNMIGLRGIGGAGKTSMAKEVAHKLRESNLIDKFIFLVVSKPPDFKKTREEFAKGLDLNLEEVKEEELSSKILSRITKMDKKLLITLDDVWEKFDLIEKLGIPSDHKGCTLLIITRSSNVCMEMECRMIELQMLNNKEALKLFEAHAKLNNSCHGLKGMPEKFVEHCGGIPVVIVAIARALKNKQAPIWKDALKTLEDRAVDQNLEGAYKCLKLSYDNLKNQKSKDLFLISSLFPEDYQVPIQVLTEIGIGLGSFGENDRYHLARSEVHEAIGELIDFSLLLHGRDECVEMHDSIREVALWIGERDIQSLSDSKMAMKESLRYLLWKNDDFSTNFNGSKLEVLLLFLDGSKEFKVSGAFFKEMMRLKVLVLFNNNYYYKRIPALSLMNSLQPLKDIRTLILQRLKLGDICALGNLLSLNTLRFLSCSIIELPREFLKLKKLGSLEVERCKIKKNNPFEVIERCTQLEELTFVANRCDNEENDAISHNRSSLTLHRYCISSKNLSGYFEKYGFMSRCVQIDDPLSHLVSETTFKQLVKGAELLILEGEDAPRIWKNFVLDDIVATDDRGMMNDLIVLHLSSCPYMEFLIDTKDHDSGVAGFCNLFGLHLSNVEVEDLCHGPLPSGVWEQLGIMKLNKCHRLKSILSNGNYNLFHLKSMKLEDCPMLVSVFQPSTARSLMKLEKLTIRNCSALECILVSEDSDSNLKSYHDSLFPKLKKLQIEFCDKLRRILPVLFVGGLASLEMLSIYKCEQLEYMFDKFEEGEDAMLPSLEKLQVVGVPNFIGIFREYYQLMSPPMQKPSPPLSRHNSNNINQSPARRVFSWVQACCSLNKSRPASEDTKITVPEQRPHDHRVPQDN 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3188g00005 1017 Gene3D - 294 380 IPR042197 -
Pral3188g00005 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 389 IPR027417 -
Pral3188g00005 1017 Gene3D Ribonuclease Inhibitor 864 953 IPR032675 -
Pral3188g00005 1017 Gene3D Ribonuclease Inhibitor 718 863 IPR032675 -
Pral3188g00005 1017 MobiDBLite consensus disorder prediction 992 1017 - -
Pral3188g00005 1017 Gene3D Ribonuclease Inhibitor 450 680 IPR032675 -
Pral3188g00005 1017 PRINTS Disease resistance protein signature 163 178 - -
Pral3188g00005 1017 PRINTS Disease resistance protein signature 327 341 - -
Pral3188g00005 1017 PRINTS Disease resistance protein signature 237 251 - -
Pral3188g00005 1017 PRINTS Disease resistance protein signature 835 851 - -
Pral3188g00005 1017 MobiDBLite consensus disorder prediction 998 1017 - -
Pral3188g00005 1017 Pfam NB-ARC domain 146 378 IPR002182 GO:0043531
Pral3188g00005 1017 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 40 916 - -
Pral3188g00005 1017 SUPERFAMILY L domain-like 451 945 - -
Pral3188g00005 1017 Gene3D - 123 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3188g00005 Pral-Chr3188 176921 180222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3188g00005 164 535 WRKY Transcription Factor Family AT5G45050 27.089 2.71e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3188g00005 - - pcin:129314094 1071.61