Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3185g00023 ATGGACTATCCCACATTCCAACAACATCAGCAGCAACAGGAACAAGGCTACGACTCATCTCAAAATCAAGCCTTCGATCAATCTTCCCAATCCTATTATGGGTACAATCAACAATACGACCAGCAATACGTATACTATTCCAATCAAGATCAAGGAAATTCATATGCCCACCAACAATACCAGCAGGAATCCACCTCCATTCACCCTCCTGGAGCCCCAACACCTCCCGAACAGGCTCAGATTCAAAATCAACAATTTTTGAACCAGGATTCAGGTGCGGCGCTCGGTGGCGCAATGAATCCGGCAGCTGCAGCTGTGGCGATTGCTGCTCTCTCGCAGCTCACTCAGTTTGCTGGAAACCCTCCGATTGGGCAGTCTCGATACAGAGTTGTTGGCAGCAGGGGCAGACCATTTAGACGGGGTGGTCGTGGGCATTTCAATCCCCGAGGTCGTTCCCCTTACCGTGGTGGAGGTCGTGGCCATGGGGGTGGTAGGCACTTCCCATCTCATTCTTCAGAATTTGTACCAGCTGCTACTGAAGGCACATCGGTGGCACAGCAACCTTCATCAATATCTGGGCCTATTCCAGCCCAGGTTCCAGTGGCAACATTGCATCCGCCACCATGTAAATTATGGTGCGAGGTTTGCAAGGTTGAGTGCAATTCTGCTGAGATTATGGAGCAACATAAAAATGGAAAGCGGCATAAAAAGAATTTGCAGGTACATGAGGAATTACAAAGGCGCAAAGCTATAAATGGACAACAGAGTAGTCAGATGCCCTCTTCTCAATTGAATTTAACAACCCAGGCTGAGAAAATTCTTGAATTGAAGGCAGAAGGGTGTCCAGCAGAAAATATGGATCCTAGAGCAACAGATGACAATCCAAAGAATGAACTTGATTTGCAGAACAATACTGGAGAAGCTTCAGAAGCTCCAGATGATGACTCTGAGGAAAAACCCAGGGATGGCTTGGCTTCGAGGGGCCGTGGTTTCAAGCGAAAGATGAGAGGAGGAAGGGGAGGTAAATACATGAGAAATCACGATGGGTCAAGAAAGCCAGTGGAACCTCCTAAACCTAAACAGGCTATTTCTTTCATATGTGAGTTGTGTAATGTTATATGTGAGTCACAGGTGGTTTATGACAGTCACTTGATCGGTAAAAAGCACCAGTCGAATCTTAAACGGGTCCATGGGCACCAAGCCATGTCCCAAGAACCAGTGCCGCAGTCAGTTCCCCCAGCTAACACCAGTGCTGTGTCTAATTTTGTTGACATCAATGCTCTTGCAAATTCAATTAACTCTCAAGTCCAACAAGGTGTTAATGATCCACAAGTCCTCTTGGCTCAGCTCCTAATGACAGTATTGTCTCAAGCTCAAGCAGCAACATCTGCAGCCGCCCCCACAGGATCTGTAGCTGCTCAGCTTTCGGCACTCATGCCAGGCTCTAGCTGCGGACCAGCATTTCAACATGTCCTGCCGACACAAGCATCAGGAAGTTCTGCACATGGTGAGAATGAAAATCCTGCAGGGAAGGCAAAAGTTCAGGTGCTATCTGATCCAACTCCTGCTGATGGTCCTCAAACTGCAGGTGGAATCTCTGAAACTGAAGAGAAGATACATGAAACACCCGCAGAAAATCCAAGTGCAGCAGATGAGCAAGGACCTTCACAAGGCAATGCTCCTACTTTGTAG 1692 0.477 MDYPTFQQHQQQQEQGYDSSQNQAFDQSSQSYYGYNQQYDQQYVYYSNQDQGNSYAHQQYQQESTSIHPPGAPTPPEQAQIQNQQFLNQDSGAALGGAMNPAAAAVAIAALSQLTQFAGNPPIGQSRYRVVGSRGRPFRRGGRGHFNPRGRSPYRGGGRGHGGGRHFPSHSSEFVPAATEGTSVAQQPSSISGPIPAQVPVATLHPPPCKLWCEVCKVECNSAEIMEQHKNGKRHKKNLQVHEELQRRKAINGQQSSQMPSSQLNLTTQAEKILELKAEGCPAENMDPRATDDNPKNELDLQNNTGEASEAPDDDSEEKPRDGLASRGRGFKRKMRGGRGGKYMRNHDGSRKPVEPPKPKQAISFICELCNVICESQVVYDSHLIGKKHQSNLKRVHGHQAMSQEPVPQSVPPANTSAVSNFVDINALANSINSQVQQGVNDPQVLLAQLLMTVLSQAQAATSAAAPTGSVAAQLSALMPGSSCGPAFQHVLPTQASGSSAHGENENPAGKAKVQVLSDPTPADGPQTAGGISETEEKIHETPAENPSAADEQGPSQGNAPTL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3185g00023 563 MobiDBLite consensus disorder prediction 175 192 - -
Pral3185g00023 563 SMART ZnF_U1_5 362 396 IPR003604 GO:0003676|GO:0008270
Pral3185g00023 563 SMART ZnF_U1_5 210 242 IPR003604 GO:0003676|GO:0008270
Pral3185g00023 563 MobiDBLite consensus disorder prediction 134 192 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 1 32 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 279 358 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 489 504 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 314 329 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 489 563 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 341 355 - -
Pral3185g00023 563 Pfam Zinc-finger of C2H2 type 365 389 - -
Pral3185g00023 563 Pfam Zinc-finger of C2H2 type 212 235 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 53 68 - -
Pral3185g00023 563 PANTHER OS06G0651300 PROTEIN-RELATED 7 428 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 53 78 - -
Pral3185g00023 563 MobiDBLite consensus disorder prediction 549 563 - -
Pral3185g00023 563 Gene3D Classic Zinc Finger 346 395 - -
Pral3185g00023 563 Gene3D Classic Zinc Finger 205 244 - -
Pral3185g00023 563 SUPERFAMILY beta-beta-alpha zinc fingers 358 396 IPR036236 -
Pral3185g00023 563 SUPERFAMILY beta-beta-alpha zinc fingers 211 242 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3185g00023 342 393 C2H2 Transcription Factor Family AT5G61190 36.538 3.48e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3185g00023 - - gmx:102666037 376.326