Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3181g00014 ATGGAAAGCGATAAGAACTTCTCTTCCACACCATCTTCTTCTTCTTCAACGTCAGCATCAGCAACAGTTTCAGGTTTGAAATTGCAACGTGATCAGTCTGAAAGTGATCTGATGAATAATGGTAAGCATCAGAAATGGAAGAAGAGAGAGAGAAGTGAGAGTGATGATAATAATAGTACTGATGAAGGGAATAATAAGCATTATTGTTCTACTTACAGAGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGGAAGAAGTCAAGAATATGGCTTGGAACATATCCTACTGCAGAAATGGCGGCTCGAGCTCATGATGTAGCCGCTTTAGCCATCAAAGGTCCGTCGGCTTACATCAATTTCCCAGAACTGGCTCACCGGCTTCCCCGCCCGGCCAGCTCGGCTCCCAAGGACATCCAGGCCGCGGCTGCAAAGGCGGCGGCCACCACCATCATGATCCATGATGAGGTCAAACACTGTCAAGCCACCGAGGCAGAAGCTGGAGGAGCCGAGCCAAGCCGGGAAGCGCAGGCTACTTCTTCTTCCTCCTCCTCTTCAAGTTCTGTTCCTGATCAGGGCGACGATACATGGTTTGACCTTCCAGATCTGTTCACTGATGGGGACATTAATGGAGTCTGCTCATATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGGTTTAAGGCTTGATGAGCAATTCGTATGGGACAGGTATTAA 738 0.4756 MESDKNFSSTPSSSSSTSASATVSGLKLQRDQSESDLMNNGKHQKWKKRERSESDDNNSTDEGNNKHYCSTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGPSAYINFPELAHRLPRPASSAPKDIQAAAAKAAATTIMIHDEVKHCQATEAEAGGAEPSREAQATSSSSSSSSSVPDQGDDTWFDLPDLFTDGDINGVCSYSSWNLCAVVDSGLRLDEQFVWDRY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3181g00014 245 SUPERFAMILY DNA-binding domain 70 129 IPR016177 GO:0003677
Pral3181g00014 245 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Pral3181g00014 245 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Pral3181g00014 245 MobiDBLite consensus disorder prediction 180 198 - -
Pral3181g00014 245 MobiDBLite consensus disorder prediction 1 68 - -
Pral3181g00014 245 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Pral3181g00014 245 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Pral3181g00014 245 MobiDBLite consensus disorder prediction 170 198 - -
Pral3181g00014 245 MobiDBLite consensus disorder prediction 36 62 - -
Pral3181g00014 245 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Pral3181g00014 245 CDD AP2 70 130 IPR001471 GO:0003700|GO:0006355
Pral3181g00014 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 48 212 - -
Pral3181g00014 245 MobiDBLite consensus disorder prediction 1 35 - -
Pral3181g00014 245 FunFam Ethylene-responsive transcription factor 2 70 129 - -
Pral3181g00014 245 Pfam AP2 domain 72 120 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3181g00014 Pral-Chr3181 425423 426432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3181g00014 63 241 AP2-EREBP Transcription Factor Family AT2G44940 53.398 6.20e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3181g00014 AP2 7.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3181g00014 - - pcin:129289175 276.944