Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3181g00013 ATGTTCGGGCGTGCACCACCAAGGAGTGATAACACCAAATATTATGAAATTCTTGGTGTTTCAAAAAGTGCTAGCCAAGATGAACTCAAGAAAGCCTATAAAAAGGCTGCAATCAAGAATCATCCAGATAAAGGTGGAGATCCTGAAAAGTTCAAGGAGTTAGCTCAAGCCTATGAAGTGCTTAGTGATCCTGAAAAGAGAGAAGTGTATGACCAGTATGGTGAAGATGCCCTTAAAGATGGAATGGGAGGAGGAGGAGGTGGCCCATTTCATAATCCATTTGATATATTTGAGTCATTCTTTGGCGGTTCAGCCTTTGGTGGTGGCAGTAGTTCGCGTGGAAGAAGAAAGAAACATGGTGAAGATGTGGTGCATACTTTGAAGGTTTCTTTGGAGGATCTATACAATGGCACCACAAAGAAATTATCTCTTTCTAGAAACGTGCTTTGCCCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACTGCAGGGAGATGCTTTGGATGTCAAGGTACTGGTATGAAGGTTACAACGAGGCAGATTGGACTGGGTATGATTCAACAAATGCAGCATGTCTGTCCTGATTGCAGAGGAAGCGGTGAGGTCATTAGCGAGAGAGATAAATGCCCCCAGTGCAAAGCAAACAAAGTCACTCAGGAAAAGAAGGTGCTAGAGGTGCATGTTGAGAAAGGGATGCAACAGGGTCAGAAGATTGTGTTTGAAGGACAAGCTGATGAAGCTCCTGACACAATCGCGGGAGACATTGTTTTCATCGTACAAGTAAAGGAGCACCCCAAGTTCAAGAGGAAGCATGACGACCTCTATGTTGAGCATAACCTGAGTTTAACCGAGGCACTCTGTGGCTTCCAGTTTGTCATCACCCATATGGATGGGAGGCAACTCTTGATCAAATCAAACCCAGGGGAGGTTGTCAAGCCAGGTCAATATAAAGCAATAAATGATGAGGGGATGCCACATCATAACAGGCCCTTCATGAGGGGCCGTCTCTACATCCAGTTTAATGTCGATTTCCCAGACTCAGGGTTCCTCAACCCTGACCAATGCCGGTTACTAGAAACTGTGTTACCTCGGAAGCCAAGCAAACAGTTGACAGATATGGAACTGGATGATTGTGAGGAAACCACTCTGCATGATGTCAACATTGAGGAGGAGATGAGTCGAAAGAAGCAACAGCAATATCACGAGGCGTACGATGAAGATGATGACGAGCCATCAATGCCTCGAGTGCAGTGTGCCCAGCAGTAA 1266 0.4518 MFGRAPPRSDNTKYYEILGVSKSASQDELKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDQYGEDALKDGMGGGGGGPFHNPFDIFESFFGGSAFGGGSSSRGRRKKHGEDVVHTLKVSLEDLYNGTTKKLSLSRNVLCPKCKGKGSKSGTAGRCFGCQGTGMKVTTRQIGLGMIQQMQHVCPDCRGSGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTIAGDIVFIVQVKEHPKFKRKHDDLYVEHNLSLTEALCGFQFVITHMDGRQLLIKSNPGEVVKPGQYKAINDEGMPHHNRPFMRGRLYIQFNVDFPDSGFLNPDQCRLLETVLPRKPSKQLTDMELDDCEETTLHDVNIEEEMSRKKQQQYHEAYDEDDDEPSMPRVQCAQQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3181g00013 421 CDD DnaJ 14 63 IPR001623 -
Pral3181g00013 421 FunFam DnaJ subfamily A member 2 150 216 - -
Pral3181g00013 421 Gene3D - 150 216 - -
Pral3181g00013 421 Pfam DnaJ domain 13 71 IPR001623 -
Pral3181g00013 421 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Pral3181g00013 421 FunFam dnaJ protein homolog 10 111 - -
Pral3181g00013 421 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pral3181g00013 421 CDD DnaJ_C 121 347 - -
Pral3181g00013 421 Gene3D - 264 346 - -
Pral3181g00013 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 347 IPR008971 GO:0006457|GO:0051082
Pral3181g00013 421 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 403 IPR044713 GO:0006457|GO:0030544
Pral3181g00013 421 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Pral3181g00013 421 SUPERFAMILY Chaperone J-domain 9 108 IPR036869 -
Pral3181g00013 421 Gene3D DnaJ domain 10 111 IPR036869 -
Pral3181g00013 421 MobiDBLite consensus disorder prediction 383 421 - -
Pral3181g00013 421 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Pral3181g00013 421 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pral3181g00013 421 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pral3181g00013 421 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pral3181g00013 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
Pral3181g00013 421 Pfam DnaJ central domain 150 215 IPR001305 GO:0031072|GO:0051082
Pral3181g00013 421 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 219 IPR036410 -
Pral3181g00013 421 Hamap Chaperone protein DnaJ [dnaJ]. 10 378 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pral3181g00013 421 MobiDBLite consensus disorder prediction 383 413 - -
Pral3181g00013 421 FunFam DnaJ subfamily A member 2 264 346 - -
Pral3181g00013 421 CDD DnaJ_zf 150 213 IPR001305 GO:0031072|GO:0051082
Pral3181g00013 421 Gene3D - 112 263 - -
Pral3181g00013 421 SMART dnaj_3 12 66 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3181g00013 Pral-Chr3181 346490 350791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3181g00013 5 112 C2H2 Transcription Factor Family AT1G74250 36.441 1.55e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3181g00013 K09503 - qsu:111993019 722.62