Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3181g00002 ATGCCTCCGAGGAAGAAACCCAGCTCTTCTTCCAAGAAATCGAATCCAATCAGCGAGGCTCAACCTTCCAAGTTCGGGATTCAACGTTTTTTTGAGCGCCACACCCAGAATGCTCTTCTGGCCTCTCAAAAGCAGCCAACAAATGATGAATCTGCGGACCGTCCCGTTTCTGCCCCTCAAGATTCCAAATCTGTTGCACCTCTTAACTATCGTATGCCATCTGTTACTGGGTCACAAGCTGTTGCTCCAAACAATCTAGATTCCGTTCTACCCAGAGCTGACTATAATTTGAACTCAGACATGGGGGGGCCAAAAATGGGGAGTTCAGAATTGCAAACGCGTAAAGACATCCTCCCAGCAGGAGCAAATGAATTCAATAACGTGTCGCAGAATACTCCTTCAGAGAACTTGTTAATACCAGGGTTTGATGCTGTGGAAAATCTCCTTGAGGCGTCTCCGGGAATTTCTAAGATTGTGTCCCATAAGCGCTCTAAGTTCTCACCTGGGATGTTCATAAAACAGAGCCAGGATGATGGGGTTGACGAAGTTACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACACGCCTCAGATAATTCAAGCTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTTACTAAAGGTGGCAAATTTGAAAAGTTACTTGCTTCACCAGTTACAAAGGCTGCTGAGAGGTCAACGGTGTCTAAGTATGAAAAAGGCTTGAAACGTATAAAACCAGACCAAGACATGGTTTTTGATGTCAGTTCAACTACTGCGAATGATTCCGGAGTAATTACTGGACAGAGCCCCTTCAGAACTCCACCCTCTTTATCCTATTGCTCTGACAAAGTAATTAGGGATGTTGAGAACAATGGGCTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTGGAACTGTTAGATCAAGTTGAAGATGCTATATGTGTTGAAAATGCTACAATTTGTGATAAAAATGCAAATTACATTAAGCCTCAAGATGCAATAGCTGATAATCTGCCCATCAGAGTTGACTGTGCAGCGGAAAGCACTATTATTCATACACCTAGAGAGGCCATCAGTGGGTCCAATTCTAATTATTTGGTGTTGGAGGTATCTGAAAAACATCAGCTTGCTAATTCATCTGCTCTGCAAAGCCCATGCAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGTAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATCAGGGGCTTTGTGGTGTAGATCATGATAATAATTTTTTGATCGTACACCCAGATATTCTGGTGTCTGGATCACGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGGACGGTTTTAGATGAGAGGCTAAAATATAATGAGTACTCAATTGCTGCATTAAATGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCACGATTGGTGCTCCAGAGAAACATCGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTACACAAAACCTTGATAGATGCTATCCCACGGATGTTAAATTGGATCAAACTCTTCAAGAATTCAGAGGAAAAGAAAGATGCTTATGTTGATTTTGGATGTGATAATGGGATAAAGAAAGTCGAAATATCTGAGGTAATTGATATTGAGGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCTGTCAGTGTGAAGGTTCTACCAAAGGGAAATGAAGATGAGAAGGTCATGCCATTAGAGTTCAAAACAGGGAAGGCAATGTCTGGCCAGTCATCTATAGAACATCGTGCCCAAGTGATCTTGTACACTCTTCTGATGTCTGAAAGGTACCTGAAGAATATTGATTCTGGTCTTCTATATTATCTCCGCTCAGATCAGACAGAAGGCATTGTGGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGAAATGAACTTGCAAGTGATATTCTGAGGGCGTTAACCACACAACAACTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGCAGCATTTATCATAAGGTTCAAGGAGGAAGTGCGAAGAGTAGTGGATTGGGAGATTTGTTTGACTCACATACTAATCACCTTTCATCTACTTATAGTAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGTGAAGAAAGAGATGTGGCGATCACATACTTTTAAAATGTCTGATGGTGATCCTTCTATTGCTTCAACAAACTATTTGGATATCAAACTAAGAAGTGGAGACTACGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCTAGTGGGGTGATTACAGACATTAGTCATGCCCATGTTTCTGCTTCCTTTTCAAAGCGACTGCGGATTCCTGGAAGCCTCTCCACTAGCCAAGATCTTTATAAACAGGTTTGGAGGATTGATAAAGATGAAACTGTGACTTCATTTGCTGTTATGAGGTTTAATCTAGTACAACTTTTCCTACAAAATGATCAAAGTGCTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCCAAATTTGACAGTGGATCTATGGTCAGTCAGGACCCAGCAATATCATATGTGTGGTCAGAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACAGCAAAGGATTACGCACTCATACTAGGAATGCCTGGAACAGGGAAGACATCAACCATGGTTCATGCTGTCAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTTAGAGAACACTGCCTTTCAGCAACGAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCGCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTTGTACAGAGTGCAGAAGCTCGAGAGAATGGAATGGGTGTAAGTTTATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGCTGCGGTTCCACTGAGATTGCTAATGCAAAACTTGAGTTCTCTACCTTAAAATGGGGCTTACCTTGGCTAAAAAATGTTTTGAATCCAGACAGGCCAGTGATATTTATTGATACTGATAAATTGCCCGCTTTAGAGGCGAGAGAACAGAAGACCATAAATAACCCTGTTGAAGCTCACATAATTGTTGAGATAGCAAAGGCATTGATAAAAAATGGAATTGGAGAAGAACAAGTTGGCATTATTACCCCCTACAATTCCCAGGCAAACCTCATCCGCCAGGCTGCTTGCGTGACCTCGTTGGAGATTCATACAATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCTTTTGTGAGGTCCAGTGAAAACCCATCAAGCTGTGCGTCTTCTCTGCTTGGAGACTGGCATAGGATAAATGTAGCTCTCACACGTGGCAAGAAAAAGCTGATCATGGCGGGTTCCTGTAGAACTCTATCAAAGGTTCCACTACTGAAGCTTCTCATCAAAAAGGTTGAGCAGCAATCGGGTATTATTAGTCTGTCTAAGAAGGATATCTATCAGAAAGGAGAGCTCAAAAGGTGTTCTCACATGAGATGA 4059 0.4149 MPPRKKPSSSSKKSNPISEAQPSKFGIQRFFERHTQNALLASQKQPTNDESADRPVSAPQDSKSVAPLNYRMPSVTGSQAVAPNNLDSVLPRADYNLNSDMGGPKMGSSELQTRKDILPAGANEFNNVSQNTPSENLLIPGFDAVENLLEASPGISKIVSHKRSKFSPGMFIKQSQDDGVDEVTWKISPVNERLQAVSKHTPQIIQALAESSRINLLPVGISSENQTSLTKGGKFEKLLASPVTKAAERSTVSKYEKGLKRIKPDQDMVFDVSSTTANDSGVITGQSPFRTPPSLSYCSDKVIRDVENNGLSDQLYLRQHKKALLELLDQVEDAICVENATICDKNANYIKPQDAIADNLPIRVDCAAESTIIHTPREAISGSNSNYLVLEVSEKHQLANSSALQSPCKVLRLINEQTGEEKAVNLLEEWSYSVVAPGDTVNIIGQFDDQGLCGVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALNGTLLHQIFQAGLIKDSPTINFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRMLNWIKLFKNSEEKKDAYVDFGCDNGIKKVEISEVIDIEEMAWAPKYGLKGMIDASVSVKVLPKGNEDEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKNIDSGLLYYLRSDQTEGIVVQRSDLVGLIMRRNELASDILRALTTQQLPPMLQSPSICRGCRHLNVCSIYHKVQGGSAKSSGLGDLFDSHTNHLSSTYSKFLCHWDRLIDLEAKETELVKKEMWRSHTFKMSDGDPSIASTNYLDIKLRSGDYVILSTESSRQAIASGVITDISHAHVSASFSKRLRIPGSLSTSQDLYKQVWRIDKDETVTSFAVMRFNLVQLFLQNDQSAHLRKMIVDLEAPKFDSGSMVSQDPAISYVWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGVSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLSCGSTEIANAKLEFSTLKWGLPWLKNVLNPDRPVIFIDTDKLPALEAREQKTINNPVEAHIIVEIAKALIKNGIGEEQVGIITPYNSQANLIRQAACVTSLEIHTIDKYQGRDKDCILVSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMAGSCRTLSKVPLLKLLIKKVEQQSGIISLSKKDIYQKGELKRCSHMR 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3181g00002 1352 Pfam Domain of unknown function DUF83 625 734 IPR022765 -
Pral3181g00002 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 1317 IPR027417 -
Pral3181g00002 1352 CDD SF1_C_Upf1 1133 1326 IPR047187 -
Pral3181g00002 1352 Gene3D - 859 1030 IPR027417 -
Pral3181g00002 1352 Gene3D - 1031 1130 IPR027417 -
Pral3181g00002 1352 Gene3D - 1131 1344 IPR027417 -
Pral3181g00002 1352 MobiDBLite consensus disorder prediction 7 22 - -
Pral3181g00002 1352 FunFam DNA replication helicase 1131 1344 - -
Pral3181g00002 1352 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 875 1024 - -
Pral3181g00002 1352 FunFam DNA replication helicase Dna2 581 734 - -
Pral3181g00002 1352 CDD DEXXQc_DNA2 932 1132 IPR026851 GO:0017116
Pral3181g00002 1352 Gene3D - 471 734 IPR011604 -
Pral3181g00002 1352 Pfam DNA replication factor Dna2 416 618 IPR014808 -
Pral3181g00002 1352 MobiDBLite consensus disorder prediction 1 68 - -
Pral3181g00002 1352 Pfam AAA domain 933 1024 IPR041677 GO:0004386
Pral3181g00002 1352 Pfam AAA domain 1035 1100 IPR041677 GO:0004386
Pral3181g00002 1352 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 1029 1130 - -
Pral3181g00002 1352 CDD DNA2_N-like 471 705 - -
Pral3181g00002 1352 PANTHER DNA2/NAM7 HELICASE FAMILY 266 1327 IPR045055 -
Pral3181g00002 1352 MobiDBLite consensus disorder prediction 35 68 - -
Pral3181g00002 1352 Pfam AAA domain 1109 1309 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3181g00002 Pral-Chr3181 31494 46983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3181g00002 1 1074 Core DNA Replication Machinery Family AT1G08840 53.269 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3181g00002 K10742 - qsa:O6P43_017137 1759.96