Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3181g00001 ATGCCTCCGAGGAAGAAACCCAGCTCTTCTTCCAAGAAATCGAATCCAATCAGCGAGGCTCAACCTTCCAAGTTCGGGATTCAACGTTTTTTTGAGCGCCACACCCAGAATGCTCTTCTGGCCTCTCAAAAGCAGCCAACAAATGATGAATCTGCGGACCGTCCCGTTTCTGCCCCTCAAGATTCCAAATCTGTTGCACCTCTTAACTATCGTATGCCATCTGTTACTGGGTCACAAGCTGTTGCTCCAAACAATCTAGATTCCGTTCTACCCAGAGCTGACTATAATTTGAACTCAGACATGGGGGGGCCAAAAATGGGGAGTTCAGAATTGCAAACGCGTAAAGACATCCTCCCAGCAGGAGCAAATGAATTCAATAACGTGTCGCAGAATACTCCTTCAGAGAACTTGTTAATACCAGGGTTTGATGCTGTGGAAAATCTCCTTGAGGCGTCTCCGGGAATTTCTAAGATTGTGTCCCATAAGCGCTCTAAGTTCTCACCTGGGATGTTCATAAAACAGAGCCAGGATGATGGGGTTGACGAAGTTACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACACGCCTCAGATAATTCAAGCTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTTACTAAAGGTGGCAAATTTGAAAAGTTACTTGCTTCACCAGTTACAAAGGCTGCTGAGAGGTCAACGGTGTCTAAGTATGAAAAAGGCTTGAAACGTATAAAACCAGACCAAGACATGGTTTTTGATGTCAGTTCAACTACTGCGAATGATTCCGGAGTAATTACTGGACAGAGCCCCTTCAGAACTCCACCCTCTTTATCCTATTGCTCTGACAAAGTAATTAGGGATGTTGAGAACAATGGGCTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTGGAACTGTTAGATCAAGTTGAAGATGCTATATGTGTTGAAAATGCTACAATTTGTGATAAAAATGCAAATTACATTAAGCCTCAAGATGCAATAGCTGATAATCTGCCCATCAGAGTTGACTGTGCAGCGGAAAGCACTATTATTCATACACCTAGAGAGGCCATCAGTGGGTCCAATTCTAATTATTTGGTGTTGGAGGTATCTGAAAAACATCAGCTTGCTAATTCATCTGCTCTGCAAAGCCCATGCAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGTAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATCAGGGGCTTTGTGGTGTAGATCATGATAATAATTTTTTGATCGTACACCCAGATATTCTGGTGTCTGGATCACGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGGACGGTTTTAGATGAGAGGCTAAAATATAATGAGTACTCAATTGCTGCATTAAATGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCACGATTGGTGCTCCAGAGAAACATCGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTACACAAAACCTTGATAGATGCTATCCCACGGATGTTAAATTGGATCAAACTCTTCAAGAATTCAGAGGAAAAGAAAGATGCTTATGTTGATTTTGGATGTGATAATGGGATAAAGAAAGTCGAAATATCTGAGGTAATTGATATTGAGGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCTGTCAGTGTGAAGGTTCTACCAAAGGGAAATGAAGATGAGAAGGTCATGCCATTAGAGTTCAAAACAGGGAAGGCAATGTCTGGCCAGTCATCTATAGAACATCGTGCCCAAGTGATCTTGTACACTCTTCTGATGTCTGAAAGGTACCTGAAGAATATTGATTCTGGTCTTCTATATTATCTCCGCTCAGATCAGACAGAAGGCATTGTGGTTCAAAGATCTGACTTAGTTGGGCTAATCATGCGACGAAATGAACTTGCAAGTGATATTCTGAGGGCGTTAACCACACAACAACTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGCAGCATTTATCATAAGGTTCAAGGAGGAAGTGCGAAGAGTAGTGGATTGGGAGATTTGTTTGACTCACATACTAATCACCTTTCATCTACTTATAGTAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGTGAAGAAAGAGATGTGGCGATCACATACTTTTAAAAGTCAGAATAGTACTGGCCTTTCTTCTGTTATCCTTGATGCTTCAAATAAGATTCCATGTCCGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTAATCCATCTTCTCTATCTGAAGTGTCTGATGGTGATCCTTCTATTGCTTCAACAAACTATTTGGATATCAAACTAAGAAGTGGAGACTACGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCTAGTGGGGTGATTACAGACATTAGTCATGCCCATGTTTCTGCTTCCTTTTCAAAGCGACTGCGGATTCCTGGAAGCCTCTCCACTAGCCAAGATCTTTATAAACAGGTTTGGAGGATTGATAAAGATGAAACTGTGACTTCATTTGCTGTTATGAGGTTTAATCTAGTACAACTTTTCCTACAAAATGATCAAAGTGCTCATCTGAGGAAAATGATTGTTGATCTTGAGGCTCCCAAATTTGACAGTGGATCTATGGTCAGTCAGGACCCAGCAATATCATATGTGTGGTCAGAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACAGCAAAGGATTACGCACTCATACTAGGAATGCCTGGAACAGGGAAGACATCAACCATGGTTCATGCTGTCAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGACATGAAGCTGTGCATGAGGAGGTTAGAGAACACTGCCTTTCAGCAACGAATGTACAAAATGTTGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACATGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGGACTTTTGATGTATGCATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCGCTCATGTTTTCCTCAATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCGCTTGTACAGAGTGCAGAAGCTCGAGAGAATGGAATGGGTGTAAGTTTATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATCATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGCTGCGGTTCCACTGAGATTGCTAATGCAAAACTTGAGTTCTCTACCTTAAAATGGGGCTTACCTTGGCTAAAAAATGTTTTGAATCCAGACAGGCCAGTGATATTTATTGATACTGATAAATTGCCCGCTTTAGAGGCGAGAGAACAGAAGACCATAAATAACCCTGTTGAAGCTCACATAATTGTTGAGATAGCAAAGGCATTGATAAAAAATGGAATTGGAGAAGAACAAGTTGGCATTATTACCCCCTACAATTCCCAGGCAAACCTCATCCGCCAGGCTGCTTGCGTGACCTCGTTGGAGATTCATACAATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCTTTTGTGAGGTCCAGTGAAAACCCATCAAGCTGTGCGTCTTCTCTGCTTGGAGACTGGCATAGGATAAATGTAGCTCTCACACGTGGCAAGAAAAAGCTGATCATGGCGGGTTCCTGTAGAACTCTATCAAAGGTTCCACTACTGAAGCTTCTCATCAAAAAGGTTGAGCAGCAATCGGGTATTATTAGTCTGTCTAAGAAGGATATCTATCAGAAAGGAGAGCTCAAAAGGTGTTCTCACATGAGATGA 4188 0.4126 MPPRKKPSSSSKKSNPISEAQPSKFGIQRFFERHTQNALLASQKQPTNDESADRPVSAPQDSKSVAPLNYRMPSVTGSQAVAPNNLDSVLPRADYNLNSDMGGPKMGSSELQTRKDILPAGANEFNNVSQNTPSENLLIPGFDAVENLLEASPGISKIVSHKRSKFSPGMFIKQSQDDGVDEVTWKISPVNERLQAVSKHTPQIIQALAESSRINLLPVGISSENQTSLTKGGKFEKLLASPVTKAAERSTVSKYEKGLKRIKPDQDMVFDVSSTTANDSGVITGQSPFRTPPSLSYCSDKVIRDVENNGLSDQLYLRQHKKALLELLDQVEDAICVENATICDKNANYIKPQDAIADNLPIRVDCAAESTIIHTPREAISGSNSNYLVLEVSEKHQLANSSALQSPCKVLRLINEQTGEEKAVNLLEEWSYSVVAPGDTVNIIGQFDDQGLCGVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALNGTLLHQIFQAGLIKDSPTINFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRMLNWIKLFKNSEEKKDAYVDFGCDNGIKKVEISEVIDIEEMAWAPKYGLKGMIDASVSVKVLPKGNEDEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKNIDSGLLYYLRSDQTEGIVVQRSDLVGLIMRRNELASDILRALTTQQLPPMLQSPSICRGCRHLNVCSIYHKVQGGSAKSSGLGDLFDSHTNHLSSTYSKFLCHWDRLIDLEAKETELVKKEMWRSHTFKSQNSTGLSSVILDASNKIPCPKSLKDNCFIYRFVRCNPSSLSEVSDGDPSIASTNYLDIKLRSGDYVILSTESSRQAIASGVITDISHAHVSASFSKRLRIPGSLSTSQDLYKQVWRIDKDETVTSFAVMRFNLVQLFLQNDQSAHLRKMIVDLEAPKFDSGSMVSQDPAISYVWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVREHCLSATNVQNVDEIKVRLEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGVSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLSCGSTEIANAKLEFSTLKWGLPWLKNVLNPDRPVIFIDTDKLPALEAREQKTINNPVEAHIIVEIAKALIKNGIGEEQVGIITPYNSQANLIRQAACVTSLEIHTIDKYQGRDKDCILVSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMAGSCRTLSKVPLLKLLIKKVEQQSGIISLSKKDIYQKGELKRCSHMR 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3181g00001 1395 Gene3D - 1074 1173 IPR027417 -
Pral3181g00001 1395 Gene3D - 902 1073 IPR027417 -
Pral3181g00001 1395 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 1072 1173 - -
Pral3181g00001 1395 Gene3D - 1174 1387 IPR027417 -
Pral3181g00001 1395 FunFam DNA replication helicase 1174 1387 - -
Pral3181g00001 1395 Pfam DNA replication factor Dna2 416 618 IPR014808 -
Pral3181g00001 1395 MobiDBLite consensus disorder prediction 7 22 - -
Pral3181g00001 1395 FunFam DNA replication ATP-dependent helicase/nuclease DNA2 918 1067 - -
Pral3181g00001 1395 FunFam DNA replication helicase Dna2 581 734 - -
Pral3181g00001 1395 Gene3D - 471 734 IPR011604 -
Pral3181g00001 1395 MobiDBLite consensus disorder prediction 1 68 - -
Pral3181g00001 1395 PANTHER DNA2/NAM7 HELICASE FAMILY 266 1370 IPR045055 -
Pral3181g00001 1395 Pfam Domain of unknown function DUF83 625 734 IPR022765 -
Pral3181g00001 1395 CDD SF1_C_Upf1 1176 1369 IPR047187 -
Pral3181g00001 1395 CDD DNA2_N-like 471 705 - -
Pral3181g00001 1395 MobiDBLite consensus disorder prediction 35 68 - -
Pral3181g00001 1395 CDD DEXXQc_DNA2 975 1175 IPR026851 GO:0017116
Pral3181g00001 1395 Pfam AAA domain 1078 1143 IPR041677 GO:0004386
Pral3181g00001 1395 Pfam AAA domain 976 1067 IPR041677 GO:0004386
Pral3181g00001 1395 Pfam AAA domain 1152 1352 IPR041679 -
Pral3181g00001 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1360 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3181g00001 Pral-Chr3181 31494 46983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3181g00001 1 1117 Core DNA Replication Machinery Family AT1G08840 54.770 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3181g00001 K10742 - cave:132181879 1814.28