Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral317g00001 GATGTGTGTCTTGCACTTCTTCATCAGAATTCTAAAATTCGGGAGGCATCTAAGGTTGCCCTGCTGTTGCCTGATATCATGAAACTGATCTGTGCTTTGGCGGCTCATCGGAAATTTGCTGCTCTGTTTGTGGACCGTGGGGGCATGCAAAAATTGCTTGCAGTTCCAAGAATGGCTCAAACTTATTTTGGACTTTCTTCCTGCCTATTCACTATTGGTTCTTTGCAGGGAATTATGGAACGGGTCTGTGCTCTTCCATCAGACGTGGTCTATCATGTGGTTGAATTGGCTCTCCAACTAGTTGACTGCTCCCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTTAGAGCAGTTCTTGATGCTTTTGATGCTCAGGATGGATTGCAGAAGTTACTGGGCCTTCTAAATGATGCTGCTGCTGTAAGATCAGGCGTAAATTCTGGGGCCTTGAGCCTCTCAAGTGGATCATTTCGAAATGATCGATCACCTGCAGAAGTCCTGACATCATCTGAGAAGCAGATAGCTTATCACACTTGTGTTGCTTTGCGGCAATATTTTAGAGCACATCTTCTTTTACTGGTGGATTCCATTCGCCCAAACAAAAGCAATCGTAGTGCTGCTAGGAATATTCCAAGTGCAAGAGCAGCATACAAGCCACTGGACATTAGTAATGAGGCAATTGATGCAGTATTCCTGCAACTACAGAAAGATCGGAAGCTAGGTCCTGCATTTGTTAGAACACGTTGGCCTGCGGTTGAGAAGTTCTTGGCATATAATGGGCATGCTACGATGCTGGAGTTGTGTCAGGCTCCACCTGTGGAACGATATTTGCATGATTTGCTTCAATATGCATTGGGTGTCCTGCACATCGTTACACTGGTACCCAGCAGTCGCAAGATGATTGTGAACACAACATTAAGCAATAATCGTGTTGGCATAGCAGTCATTTTGGATGCAGCAAACATTGCTACTAGTCATGTGGACCCTGAGATTATTCAGCCTGCATTGAGTGTGTTAGTTAATCTTGTTTGTCCTCCACCATCAATCAGCAATAAGCCACCTCTAATTGCACAAGGTCAGCAGTCAGCTTCTACCCAGACCACAAGTGGTCCTCCTACGGAGACAAGAGACAGAAACAATGAGCGTAACATCTCAGACAGAGCTGTTCATATTTCTAACCAGACTGATCAAAGGGAGCAGAATGGAGAATCTGGTGTTATGGATCGAGTTAGTGCTGCCACAGCTACTACACAGATTGCTAACACCACCCCACAAACTCCTGGTGCCACTGCAACTTCAGGATTGGTTGGCGACCGTAGAATATCTCTGGGTGCTGGAGCAGGCTGTGCTGGTCTGGCTGCCCAACTGGAACAAGGATATCGTCAAGCCAGAGAGGCTGTCCGCTCTAATAATGGAATTAAAGTCCTGCTGCATCTCCTCCAACCACGTATATATTCACCTCCTGCTGCTTTAGACTGCCTCCGTGCTCTAGCATGTCGAGTCCTACTTGGTTTAGCCAGAGATGATACTATTGCACACATATTGACGAAGCTTCAGGTAGGGAAAAAGCTATCTGAACTGATAAGAGATTCAGGCAGTCAGACACCTGGTACAGAACAGGGAAGGTGGCAAACTGAACTTTCCCAGGCTGCAATTGAGCTAATTGGGATTGTGACCAACTCAGGTCGTGCTAGTACGTTAGCAGCTACTGATGCAGCTACTCCTACATTAAGGCGTATTGAAAGAGCAGCAATAGCTGCTGCCACTCCTATTACTTACCATTCTAGGGAACTTTTGCTCCTAATTCATGAGCACCTGCAAGCATCTGGGTTGTCCCTAACTGCCTCTACATTGCTTAAAGAGGCTCAGTTGAATCCTTTGCCATCGTTGGTTGCTCCGTCATCTCTTGCACAAGCAGCCACCTCACAGGAAGCTACTTCAATACAACTTAGTTGGCCCTCTGGCCGGACTCAGTCTGGATTTCTCACTAGCAAATTAAAGCATAATGCAAAGGATGAGGATTCCAGCATGAAGCAAGATTCAGCCATCTCTTCTAAGAAAAAGACACTGACTTTCTCATCTTCTTTTGGCCTACATTCAAGACATCAATCTGTTGATTCTCAGCAGTCACTAGTAAGAAGAGGATTGACTACTGGGAAGGAGCTTTCTGAATCTTCAAGTTCATTAGAAACTCCCTCAGAACCTTCAATGAAACATAACATTGATGGAGAGTCTCAGTATAAGACCCCGATAATCTTGCCTATGAAACGCAAGTTACCTGATTTGAAGGATATAGGAGTATTGTCATCATCTGGAAAGCGACTAAATGCTGGGGATCAAGGACTTCGATCACCTATTTGTCCAACTCCAAGTACGACCCGTAAAAGCAGCCTGCAGAATGATGCTGTTGGGTTTTTTACTCCAAGTTCCACCCTGAGAAGCCAACAAGGGCGATGCATAGGTGAGTATGTGGATGAAGGCCAATTAAACAGCTCAAATCCTGGTCAAGTAACACCATCCTCCCAAATATCAAGTGACCAGCCTAACAATCAAGAGCGTTTAACATTAGACTCTCTAGTAGTTCAGTATTTGAAACATCAGCATCGCCAATGCCCAGCTCCTATTACCACTCTTCCTCCACTATCTCTTTTGCATCCACATGTCTGTCCTGAACCAAAGCGAAGCCTTGATGCCCCATCTAATGTGACTGCTCGGCTTGCTACGCGTGAATTGAAGCATACGTATGGAGGAGTGCATGGGAATCGTAGGGACCGACAATTTGTTTATAGCAGGTTTAGGCCATGGCGTACATGTCGGGATGATGCTGGTGCATTATTGACATGCATTACTTTTATTGGGGACTCATCACGGATTGCTGTTGGGAGCCACAATGGTGAGCTCAAAATATTTGACTCCAACAATAATAATGTGGTGGAGACCTTTACATCTCATCAGTCTCCTTTGACACTTGTCCAATCTTTTGTTTCGGGAGAGACTCAACTATTGCTTTCTTCAAGCTCCCAAGATGTGAGGCTGTGGGATGCATCAGCAATAGCAATGGATCCTACCCATTCATTTGATGGGTGCAAAGCTGCCAGGTTTAGCAATAGTGGCAATGTTTTTGCTGCCTTGTCATCAGAGTCTGCTCGACGGGAAATCCTCTTGTATGATATTCAAACTGCTCAATTAGAGTCAAAGCTATCAGATACATTCGCAAATTCAACAGGAAGGGGTCATGTCTATTCCATGATACATTTTAGTCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGATCGGCGGGCCCCTGGGCCTGTTCATCGCTTTGATCAGTTCACAGACTATGGGGGCGGGGGCTTCCATCCTGCTGGAAATGAGGTTATTATAAACTCAGAAGTCTGGGATTTGCGTAAATTCAGATTGCTACGAAGTGTGCCTTCTTTAGATCAAACAGCAATAACATTCAATGGACGTGGTGATGTAATTTATGCAATCCTAAGGCGAAATATTGAGGATGTAATGTCAGCAGTCCATACGCGTCGGGTCAAACATAATCTTTTTTCAGCTTTCCGCACTGTGGATGCGGTCAATTATTCTGATATTGCTACCATTCAAGTGGATCGCTGCGTGCTTGATTTTGCAACTGAGCCAACTGATTCATTTGTTGGGTTGATTACAATGGATGATCAAGATGAGATGTTTGCATCTGCCAGGATCTATGAAATTGGCAGGAGGAGACCTACTGACGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGACGATGATGACGACGATGATGACGATGCAAATGTGGATCCTTTACTTGGCCCTGGACTTGGTGGGGAAAGTGAGAGTGATGCTGATGACTTGAGCAACGATGAAGATGATGATAGTATAACAGATCTTGACAATGACGACGATGATGGGGATTTCATTATGGATGATTTAGACTTTGATGGAGGAACTGGAATTTTGGAGATTGTGACAGAAGGCGATGAGGATGATGATGATGATAGTCAAGTACTTGAATCCTTAAGTAGCGGTGAAGAGGATTTTGTTGGTAATGGCTTTGGTTATTAG 4116 0.4483 DVCLALLHQNSKIREASKVALLLPDIMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTYFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLVDCSQDQARKNAALFFAAAFVFRAVLDAFDAQDGLQKLLGLLNDAAAVRSGVNSGALSLSSGSFRNDRSPAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAARNIPSARAAYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPAVEKFLAYNGHATMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNTTLSNNRVGIAVILDAANIATSHVDPEIIQPALSVLVNLVCPPPSISNKPPLIAQGQQSASTQTTSGPPTETRDRNNERNISDRAVHISNQTDQREQNGESGVMDRVSAATATTQIANTTPQTPGATATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTPGTEQGRWQTELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSLTASTLLKEAQLNPLPSLVAPSSLAQAATSQEATSIQLSWPSGRTQSGFLTSKLKHNAKDEDSSMKQDSAISSKKKTLTFSSSFGLHSRHQSVDSQQSLVRRGLTTGKELSESSSSLETPSEPSMKHNIDGESQYKTPIILPMKRKLPDLKDIGVLSSSGKRLNAGDQGLRSPICPTPSTTRKSSLQNDAVGFFTPSSTLRSQQGRCIGEYVDEGQLNSSNPGQVTPSSQISSDQPNNQERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLATRELKHTYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFIGDSSRIAVGSHNGELKIFDSNNNNVVETFTSHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDASAIAMDPTHSFDGCKAARFSNSGNVFAALSSESARREILLYDIQTAQLESKLSDTFANSTGRGHVYSMIHFSPSDSMLLWNGVLWDRRAPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNGRGDVIYAILRRNIEDVMSAVHTRRVKHNLFSAFRTVDAVNYSDIATIQVDRCVLDFATEPTDSFVGLITMDDQDEMFASARIYEIGRRRPTDDDSDPDDAESEEEDDDDDDDDDANVDPLLGPGLGGESESDADDLSNDEDDDSITDLDNDDDDGDFIMDDLDFDGGTGILEIVTEGDEDDDDDSQVLESLSSGEEDFVGNGFGY 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral317g00001 1371 MobiDBLite consensus disorder prediction 393 408 - -
Pral317g00001 1371 SUPERFAMILY WD40 repeat-like 944 1169 IPR036322 GO:0005515
Pral317g00001 1371 MobiDBLite consensus disorder prediction 358 418 - -
Pral317g00001 1371 SMART Lish 601 633 IPR006594 GO:0005515
Pral317g00001 1371 ProSiteProfiles LIS1 homology (LisH) motif profile. 601 633 IPR006594 GO:0005515
Pral317g00001 1371 Gene3D - 939 1263 IPR015943 GO:0005515
Pral317g00001 1371 MobiDBLite consensus disorder prediction 1251 1329 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 1341 1356 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 833 856 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 360 381 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 1341 1371 - -
Pral317g00001 1371 FunFam DDB1-and CUL4-associated factor homolog 1 936 1263 - -
Pral317g00001 1371 PANTHER VPRBP PROTEIN-RELATED 1 1367 IPR033270 GO:0016567
Pral317g00001 1371 MobiDBLite consensus disorder prediction 832 856 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 725 750 - -
Pral317g00001 1371 MobiDBLite consensus disorder prediction 1262 1283 - -
Pral317g00001 1371 SUPERFAMILY ARM repeat 93 564 IPR016024 -
Pral317g00001 1371 SMART WD40_4 1026 1064 IPR001680 GO:0005515
Pral317g00001 1371 SMART WD40_4 981 1021 IPR001680 GO:0005515
Pral317g00001 1371 SMART WD40_4 938 978 IPR001680 GO:0005515
Pral317g00001 1371 MobiDBLite consensus disorder prediction 1298 1327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral317g00001 Pral-Chr317 4 6439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral317g00001 965 1171 U-box Gene Family AT2G33340 24.336 3.09e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral317g00001 K11789 - gmx:100800133 2016.51