Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3162g00003 ATGATCATTCCCGAGAAGAATCGTCGAGAGATCTGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATTTGCTGAAACACCCCGAGATTGATGTGCCGAATCTACAGGTGATTAAGCTGATGCAGAGCTTTAAGTCGAAGGAGCATGTCCGTGAGACCTTCGCTTGGATGCACTATTACTGGTATCTCACCAACGATGGCATCGAGTTCCTCAGAACCTACCTCAACCTCCCTTCTGAGATCGTCCCTGCTACTTTGAAGAAACAAGCTAAGCCTGTTGGTAGACCTTTTGGCGGCCCAACTGGCGATCGGCCAAGAGGTCCACCCAGATTCGAAGAACGGAGATTTGGTGACCGCGATGGATACCGTGGGGTTCCCCGAGGACCTGGTGGTGACTTTGGTGACAAGGGTGGAGCGCCTGTCGATTACAGACCTTCTTTCGGGGGTTCTGGTGGGAGATCTGGTTTTGGACGTGGTGCTGGGGGTTTCGGAGCTCCAACTAGTTTAGACCTTTCCTAA 534 0.5112 MIIPEKNRREICKYLFKEGVCYAKKDFNLLKHPEIDVPNLQVIKLMQSFKSKEHVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPVGRPFGGPTGDRPRGPPRFEERRFGDRDGYRGVPRGPGGDFGDKGGAPVDYRPSFGGSGGRSGFGRGAGGFGAPTSLDLS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3162g00003 177 MobiDBLite consensus disorder prediction 111 127 - -
Pral3162g00003 177 FunFam 40S ribosomal protein S10 1 104 - -
Pral3162g00003 177 Pfam Plectin/S10 domain 3 94 IPR005326 -
Pral3162g00003 177 Gene3D - 1 104 IPR036388 -
Pral3162g00003 177 MobiDBLite consensus disorder prediction 95 177 - -
Pral3162g00003 177 PANTHER 40S RIBOSOMAL PROTEIN S10 1 170 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3162g00003 Pral-Chr3162 169899 171731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3162g00003 1 152 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 79.355 1.69e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3162g00003 K02947 K09422 zju:107430209 267.7