Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3150g00051 ATGGCTTCGATTCTTAACCCCAGTTTCTGCCGCCGCCTGTTATTAATTCTCTTGTACTTCGTTTCTTCTTTTCTCGCCATCAATTCACTTTCAAGTAGTGTTTCCATTTCTGGAAATTCCAGCCACACATTAATCTGTGCCTTGCAGAGTACCAATCGGCTCCAAGGACAAAAATCATTCCTCAACTGTACCAGTTTTCCCACTGGCATTAAAATTCAAGTGAACCCCAACATTTCCTTCTCTGAGATTGCAGGAGGGAATGGGTTTGTCTGTGCATTGAGGCCTCAGATGGGTTCTTCTTCTTCTTCTTCTTCTGTCATGTTTTGCTGGAGATTCTCTACCAATGAGACAAATGTTGCCCCCAAGCGCATTTACCATGGACCTATGATTCAAAATTTGGAAGCAGGAAACTCCCAAATCTGTGGCCTTTCAAGCTCCAACAATGGCCTTAACTGCTGGCAATGGCCTGGGTTCAACACACGTAATGTGAAAGGCTTCTCGAGTATATCTGTGGGAGAGAATTTCGTCTGTGGGTTATCGGAAACATCTGGGAATATTAATTGCCGGGGAAATAAGAGCATAATTGGAGATGAACCCAAAGGGAATTACTCTGTGATTGCTGCAGGGACGAGATATGCCTGTGCTATCTCGTCCAATAATGGAAGTTTGCACTGTTGGGGTGACGTACCAAAAGCCGCAATGACGCCTCAAGGGAGATTCATCTCTTTGGCTTTGGGAGATAATCGGAGTTGCGCTTTGAGGGCTGTGAACAGAACAGTTGATTGTTGGGGGACGGATGGTTTCAGCACGCCAGAGAGCTTCAGAAACACATCTTTTGAAGCAATCACAGCTAAAGGAAGTGTTTTCTGTGGTGTTATGTCTAATGATTATTCTTTGCATTGTTGGGGAAATGATAATTTGGGCATGAACGGGACTGCTCATAAGGTGTTTGATGAAGTCCTACCTGGTCCTTGTAGAACTGACTGTTCATGTGGACCATTGCCAGGTTCTGCACAGTTTTGTGATCTTGGTCGATCTATTTGCAGTTTTTGTGACAACCAACTACTGGAATCCCAGCCGCCGCTGCCGCCGAGTGCTTCTTCACAGTCAAGACAAAGTAATTGGAGCAGCAAAATGGTGGCATTTCTAGTGGTTGGCTGTGTTGGCTCCGTTTCTTTGATGCTAGTGTTGGCATTCTTTGTCTACAGGTATTGCAAAGGCCGAGGATGCAGGCGTGTGCACGACTCTGGCCGGTTGGATGAGCCAGAAGATCAACCAGCAATCCAACCAACTTTAGAGAAGAGATTGAGCCACATGATTAGCATGGGAAATGGAGGCCATTTGGAGGAATTTTCCTGGCAAATACTATTAGAAGCAACCAACAATTTCTCAGAAGATCAAAAAATAGGAACGGGCAGTTTTGGTTCAGTCTACCATGCCACACTCAAAGATGGTAAAGAAGTGGCCATCAAAAGAGCTGAGATCTCACCCACCTCCCCGTCAGACAAAATCATAGGAGGCTCCAGGCGTCAAGAAGACAAAGACGATGCTTTTGTCAACGAACTCGAATCTTTATCAAGACTTAACCATAAGAACCTGGTGAGATTACTAGGTTTCTTCGAGGACAACAATGAGAGAATCCTAGTCTACGATTTTATGACTAATGGCAGCCTAACCGACCATCTTCACAAACTCCACACTTCAACTTCAAATCCAAATTCTCCTCTCATGTCATGGTCAGGACGCATCAAAGTAGCTCTAGACGCAGCCAGAGGAATAGAATACCTACACAAATATGCAATTCCACCAATCATTCATCGTGATATCAAATCAGCAAACATACTATTAGACTCCAAATGGACAGCCAAAGTATCAGATTTTGGACTCTCCCTAATGGGCCCAGAAGACGAAGAGTCACACCTTTCTCTTCTAGCCGCAGGCACAGTAGGGTACATGGATCCAGAGTACTACAGGCTGCAACACTTAACCACAAAGAGCGATGTGTACAGTTTTGGTGTGGTTTTGCTAGAATTGCTTTGTGGGTATAAAGCTATACACAGGAACGAGAATGGCACGCCTAGGAATGTGGTGGATTTTGTGGTGCCGTATATTGAGCAGGATGAGATTCATAGGGTTTTGGATCGGAGGTTGCCTCCACCAACACCGTATGAGATCGAGGCAGTGGCGTTTGTGGGATATTTGGCTGCGGATTGTGTGAGATTTGAAGGACGGGAAAGGCCCACAATGACAGACGTTGTAAATAAGTTGGAAATAGCGTTGGATGCCTGTTTAGCTCAACCAAAACCAACAATTTCTCGCTTTAACTCTGGTTCTGATTCAGATTAG 2346 0.4488 MASILNPSFCRRLLLILLYFVSSFLAINSLSSSVSISGNSSHTLICALQSTNRLQGQKSFLNCTSFPTGIKIQVNPNISFSEIAGGNGFVCALRPQMGSSSSSSSVMFCWRFSTNETNVAPKRIYHGPMIQNLEAGNSQICGLSSSNNGLNCWQWPGFNTRNVKGFSSISVGENFVCGLSETSGNINCRGNKSIIGDEPKGNYSVIAAGTRYACAISSNNGSLHCWGDVPKAAMTPQGRFISLALGDNRSCALRAVNRTVDCWGTDGFSTPESFRNTSFEAITAKGSVFCGVMSNDYSLHCWGNDNLGMNGTAHKVFDEVLPGPCRTDCSCGPLPGSAQFCDLGRSICSFCDNQLLESQPPLPPSASSQSRQSNWSSKMVAFLVVGCVGSVSLMLVLAFFVYRYCKGRGCRRVHDSGRLDEPEDQPAIQPTLEKRLSHMISMGNGGHLEEFSWQILLEATNNFSEDQKIGTGSFGSVYHATLKDGKEVAIKRAEISPTSPSDKIIGGSRRQEDKDDAFVNELESLSRLNHKNLVRLLGFFEDNNERILVYDFMTNGSLTDHLHKLHTSTSNPNSPLMSWSGRIKVALDAARGIEYLHKYAIPPIIHRDIKSANILLDSKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLCGYKAIHRNENGTPRNVVDFVVPYIEQDEIHRVLDRRLPPPTPYEIEAVAFVGYLAADCVRFEGRERPTMTDVVNKLEIALDACLAQPKPTISRFNSGSDSD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3150g00051 781 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 200 766 IPR044815 GO:0004674
Pral3150g00051 781 ProSiteProfiles Protein kinase domain profile. 463 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3150g00051 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Pral3150g00051 781 Gene3D Transferase(Phosphotransferase) domain 1 553 767 - -
Pral3150g00051 781 CDD STKc_IRAK 469 757 - -
Pral3150g00051 781 SUPERFAMILY RCC1/BLIP-II 107 314 IPR009091 -
Pral3150g00051 781 Gene3D Phosphorylase Kinase; domain 1 436 552 - -
Pral3150g00051 781 FunFam Serine/threonine-protein kinase-like protein CCR4 553 774 - -
Pral3150g00051 781 Gene3D - 22 198 IPR009091 -
Pral3150g00051 781 Gene3D - 199 341 IPR009091 -
Pral3150g00051 781 SUPERFAMILY Protein kinase-like (PK-like) 440 758 IPR011009 -
Pral3150g00051 781 SMART serkin_6 463 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3150g00051 781 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Pral3150g00051 781 Pfam Protein kinase domain 463 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3150g00051 Pral-Chr3150 1320466 1323320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3150g00051 32 776 Receptor kinase-like Gene Family AT5G47850 51.706 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pral3150g00051 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3150g00051 - - qsa:O6P43_029962 946.036