Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3145g00001 ATGGATCGGCCAAATACGCAAAACCAAAGCATGCATTTGGTTCTTTCCTCTGATGCCAAGCCAAGGCTTAAATGGACTCCTGAGCTTCATCAACGATTCCTTGATGCTGTCAATCAGCTTGGAGGAGCTGAAAAGGCAACGCCGAAGGGTCTTATGAGGGTTATGGCGATTCCAGGACTTACCTTGTACCACCTAAAGAGCCACTTACAGAAATTCAGACTTGGGAAAAGCCCTCAACCAGAAGCCTTGTATAAACAAGAAGATTATAGAGAAGCCCAAAGCAGTGATGGTCATTGCAGCAGAGAAACCATTATGGGGACCCAGAATCAGATGACTGTCCAGCAGATTGCTCAGGCTCTCCAACTACAAATGGAAGTACAGAGGAAGCTTTATGAACAAATTGAGGTGCAGAGACATTTGCAGCTTCGGATTGAAGCTCAAGGGAAGTACTTGCAATCAGTGCTAGTAAAAGCTCGGGAAGTACTTGCAGGGTACAACCCTTCTGCTGCTGGTACAGAACATGCAAAAGCTGAGCTTTCTCAATTAGTCTCAATAATCAACAATGGCTGCCCAAGTTCGCCCATCTCAGAACTGACAGAAACTGGAGTTTTGAGCTTGAAAGATGGAGGAGAGAGGAAGCAAAGCAGAGAGACGATGTGTTCATTGGACAGTTCCTTGACATCTTGTGAAAGCTCAGGGACAAAGGAGGAAGAGAAGCCTCATAAGTCTAACAGAACTTCAGTTGAACTGCAATTGATGACTGTGCACTCAGAAGAAGATAAAGAATTGAATGGCGACTCAAAGAATCAAGCCTGTGGGAGAAAAAGGAGTAGAATCACTGATTCTGATGGTTATTTTCTAGAGCAAACAATCAGGAAAAGATGCAGCAGCCGGTCCAGGAAACCTGAGTTGTCTGAATTGCTTGATTTGAACAGCCAGTATCACAGTGACACTGACTCAGACTCAAAGGCCATGTACTTGAATTGCAGTTCAATACATAGGTTTTGGTAA 1011 0.4431 MDRPNTQNQSMHLVLSSDAKPRLKWTPELHQRFLDAVNQLGGAEKATPKGLMRVMAIPGLTLYHLKSHLQKFRLGKSPQPEALYKQEDYREAQSSDGHCSRETIMGTQNQMTVQQIAQALQLQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLVKAREVLAGYNPSAAGTEHAKAELSQLVSIINNGCPSSPISELTETGVLSLKDGGERKQSRETMCSLDSSLTSCESSGTKEEEKPHKSNRTSVELQLMTVHSEEDKELNGDSKNQACGRKRSRITDSDGYFLEQTIRKRCSSRSRKPELSELLDLNSQYHSDTDSDSKAMYLNCSSIHRFW 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3145g00001 336 Pfam MYB-CC type transfactor, LHEQLE motif 115 160 IPR025756 -
Pral3145g00001 336 Coils Coil 117 137 - -
Pral3145g00001 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 260 IPR044848 GO:0003700
Pral3145g00001 336 FunFam Myb family transcription factor 19 77 - -
Pral3145g00001 336 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pral3145g00001 336 Gene3D - 19 77 - -
Pral3145g00001 336 MobiDBLite consensus disorder prediction 208 246 - -
Pral3145g00001 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Pral3145g00001 336 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3145g00001 Pral-Chr3145 70139 71921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3145g00001 11 294 G2-like Transcription Factor Family AT1G69580 47.797 4.93e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3145g00001 Myb_CC_LHEQLE 2.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3145g00001 - - pcin:129321718 549.28