Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3141g00007 ATGGAAGAGAGAAGTGATTGTGAGAAGCTTGATGAAGTCATGCTTCCAGGTTTCAGATTTCACCCAACTGATGAGGAGCTTGTTGGGTTCTATCTCAAGAGAAAGATTCAGCAGAGACCTCTCTCTATAGAGCTCATAAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCAAAGTTGGCAAGTACATGTGAGAAAGAGTGGTATTTTTACTGTCCTAGAGACAGAAAATACAGAAACAGTGCACGGCCAAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCCACAGGTACTGATAGGCCCATATACTCCTCTGAGGGCTCAAAGTGCATTGGATTGAAGAAATCTCTTGTCTTCTACAAAGGAAGAGCTGCCAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGATTACCTTCTCTTTCAGACTCTTCCTCTTCACCAAAAAAGTTCTCAGAAAGAACCATCCCTGCTAATGATTCGTGGGCAATCTGCAGAATATTCAAGAAAACAAACTCTACAGCCCAAAGAGCTGTCTCCCATTCCTGGGTCTCTCCCTTACCTAATGAAATGAACACTTGTGAGGTGCTAACCAAAGACGAAGACGCTTCCAAGTTTTGTTCAAATCATAATAACATTTCGTCTTTGACAAAGAAAACTAGCTTACCCAGCCAGTTCTGTACCAACACAATCGACCCCTTAACCTCCAACACCAGTAGTGTTCATTGCCCTTTAGATGTTACCCCGTACAAACCCATCATTAACCCATTATTGCTCTACAAACCCTTTGACCAATTACCCATCATGTCATTAAATAACTCAGACCTTATGTTTTCATCATCACCTCTTGAACCATGCAGTGCTAAAGCTGCCACCATGGACATTCCCTCCATGTTACTGAACATGTCATCATCTTCTGTGCTTGGAGAATTTGGCAGTAAGGCTTCATTAGAGGCTGCAAATTTTGCAGGGTTTCAAGAACAGTACAGCACTACTACTGGGTATTCATCATCAATAGCTCTACCGGTAATCCAAGATCGGAATGGATTGGTGAAGATGAATCACCCGCATTCTAATATGAACGTGAATGTGGTGATCCCTAGAGTGTTGGAGGAGCCAGATCAGATAAATATGCACGAGGCATGGAAGTCAAATCTGCTATGGGAGAGTTCATCCTGTCCTTGA 1194 0.4263 MEERSDCEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTCEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLSDSSSSPKKFSERTIPANDSWAICRIFKKTNSTAQRAVSHSWVSPLPNEMNTCEVLTKDEDASKFCSNHNNISSLTKKTSLPSQFCTNTIDPLTSNTSSVHCPLDVTPYKPIINPLLLYKPFDQLPIMSLNNSDLMFSSSPLEPCSAKAATMDIPSMLLNMSSSSVLGEFGSKASLEAANFAGFQEQYSTTTGYSSSIALPVIQDRNGLVKMNHPHSNMNVNVVIPRVLEEPDQINMHEAWKSNLLWESSSCP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3141g00007 397 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Pral3141g00007 397 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Pral3141g00007 397 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 224 - -
Pral3141g00007 397 FunFam NAC domain-containing protein 35 23 176 - -
Pral3141g00007 397 SUPERFAMILY NAC domain 13 173 IPR036093 GO:0003677|GO:0006355
Pral3141g00007 397 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3141g00007 Pral-Chr3141 1540774 1542478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3141g00007 8 323 NAC Transcription Factor Family AT1G26870 57.538 1.69e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3141g00007 NAM 3.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3141g00007 - - pcin:129284476 575.474