Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral313g00007 | ATGCGCAAAAAGAGGCGTTTACATCAATTGAAGCATCCATTTGATTCTTATCCATTTGAGGCAATTCTCCATGGGTCATGGCAAGCTTTGAGGTGCATAGCAATTGAAGGGGGAACAATGGTCTTACATTTTAAAGATAATAACCATGTGGTTAGGGAGAAAGCTCCCATTTCAGACATTCGGATAAGGTCTAGGAAAGCAACTGTATCGGATTGCTCCTGCTTTTTAAGACCTGGAATTGACATATGTGTACTTTCTTCCTTTCAACATGCTAATGGCTCAGATCAAAATAATCTTAATGCTGTGTGGGCTGATGCTAAAATAAGTTCTATACAGAGGAAGCCACATGAACCTGGGTGCTCATGTCGGTATTATGTAAACATTTATGTTAATCAAGGTTGTATTGGTTCTGAGGTAAGAACTCTGAGTAAGGAGATCAAAGAAGTGGGAATAGATCAAATTTCGGTACTCCAAAGGCTTGAGCATAGTCCTTGTGAAGATCAACACTATCGGTGGGATTCATCTGAGGACTGGCATGCAGTACCACAAACTAGATTGCTTTCAGGGAAATTTTTATCTGATATTTCGTGGTTAATTGTCTCATCAGTTTTGAAGAAGGTTTCATTTTGTGTGAGATCGGCAGGTAACAAGATTGTATATCAAATCATAGGGGGTGATGATAATAGCTCCATACTGGATGTTGTAAATTTCAGAGTAGACAACAGCATGTTAGTACCCATCGTTTCCCAAGTTATTTCATCTGACACCGATAAGGTTGACAATAGAGATGATTCCCACAAAGATAAAGCATTTCCATCTTATAGTCCTGATGGTTTGCGTCGTTCCAAACGCCGGAATGTTCAACCCGAGCGTTACCTTGGCTGTGACGTGACTCATGTGTTGGATGTTGGTTTTGTCAGAACAAGGCCATACAAGATGGACACTCGAAAAGATGATACTGAGGATGATGAATTGTCAATGCCACTGTCATCCCTGATTGGTTTGCAAAAATGTTCTGGAGTGAAGCACGATGACAGTGGACTAAAGTTTGATAACATGAAATCCTACAACAAGCTTAAAGTGTATAAAAGGAGGCCTAAATCTAAGGAAGTGAATTCAGGTGATGCTGATAAGAATGAAAGTCAATCTCAACTTGCCATTGTTCCTGTTCCTCAAGAATGTGATCCTATTAACATTGAGCATTTTGATTCCAATGCCAAGGTCTCAAAACATCACACACAAAGAAATGTTGAATTTCCTAACAAATATTATCACCTGATGGGTAGTCCTGAACCAAAGACGAATGATATGGATTTGTTAACTTTTGAATCCCATAATCATCCCTCGAAGATTCCAGACCTTGAAGATTGTGTTGAAGAGCGTGGTGATATTGCTTCCCGATGTCATTATAATCATGGCACCCCTAAACTGAAGAGGAAGAATTCATTGGGTTTTGATGATACGGATTTTGAAGGCAGGTGGGAAGGGATAAATTCCAATAAAGCTGCAGTTCAAGGGAGAAAATATTATTCAACAATTTCAAGCAGACAATCTGATGAAGAAAGAACTTATAAAGCTAGGTCCTTAAGTGCGGGTGCCTATAAGGAATTGATAGACTCATATTTAAAGAATATGAATGCAAAACCATCCAAAGCTGAGCCACCTATAACTGAGCAGTGGATGCAATTCAAGGAAACAAGTAACTTAGGACAAAAGAGCGAAACAAAGGCCCCCCAAATGGAGGACGAGGAAGAAACTGATGAACTGGATATGTTGTGGAGAGAAATGGAAGTTTCATTGGCATCAAGTTATGTTGAAGAAGACACGGAGGGTTCAAGCGCTGCAGTTTTTACTGAGACCATGGAAAAGCCTGATTCACTTTGTTGCCATGATTATAGAATGAATGAAGAAGTTGGAATTTACTGTCTCTTATGTGGCATTGTCAGTACTGAGATAAAAGATATTTTGCCACCCTTTTTGGAACGTTCGATGTGGCACTATGAGGAGAAGCAACACAGTGGAGAAGGTTCAGAACCAGAGCCAAAGGCTGACGAAAATGATGGTTTCCATCTTTTTTTTACTGATGCTTTGCCTGATCAACCTATAACTGGAGAAAATGATAATGTATGGGCATTAATTCCTGAACTCAGGTGGAAGTTGCACGTCCACCAAAAGAGAGCTTTTGAATTTCTTTGGAAAAATATAGCTGGGTCTATGGACCCCACACTTATGGAAGCAGCTTCCAAAAAAAGAGGTGGTTGCGTGATATCTCATTCTCCTGGTGCTGGAAAAACATTCCTTATTATTGCATTTCTTGTTAGCTACTTGAAGTTATTCCCAGGGAAGCGACCATTGGTTCTTGCTCCGAAGACAACACTTTACACATGGTATAAAGAATTTATTAAATGGAAAATTCCTATTCCAGTGTATCTAATTCATGGTCGTAGAACCTACCGAGCGTTCAAGCAGAATACTGTGGCCTTTAATGGTGGTCCTAAACCTACTGATGATGTCAAGCATATTTTGGATTGCCTGGAAAAGATCCAAAAGTGGCACACGCACCCAAGTGTTCTAGTCATGGGTTATACTTCATTTTTAACATTGATGCGAGAGGATTCAAAGTTTTCTCACAGAAAGTACATGGCTAAAGTATTAAGGGAAAGTCCTGGTATTCTTATATTGGACGAAGGGCACAATCCTAGAAGCACAAAATCAAGGTTGAGGAAAGTATTGATGAAAGTACAGACGGAATTGAGAATATTACTTTCAGGTACATTGTTCCAGAACAATTTCTGTGAATACTTCAACACTCTTTGCTTGGCTAGACCAAAGTTTGCTTTTGAAGTGTTGAAAAAACTGGACCCTAAATACAAGAGAAAAATGAAAGGAAGAGGAAAAGCACGCCATTTAATAGAGTCACGAGCTAGAAAATTCTTCTTGGATACTATTGCGAAAAAAGTTGACTCCAAAGATAAAAAAGAGCAAATGCAGGGTCTGAACATGTTGAGAAAGATGACCAGTGGTTTTATAGATGTTTATGAAAATGGGAATTCAGAGGATCTTCCTGGTTTACAAATCTATACATTGGTAATGAATACTACTGATATACAGCATGAGATATTGAGTAAACTCCAGAAGAAAATGTCTGCCTGCAGTGGATATCCTTTGGAGTTAGAGCTTTTGATAACCCTTGGATCGATACATCCTTGGTTAGTCAAAACAGCTGTATGTGCGGAGAAGTTTTTTTCTATAGATCAATTGATGGAGCTAGAGAAATGGAAGTATGATTTGAAAAAAGGATCAAAAGTGAAATTTGTTTTGAGCCTGGTCTATCGCGTGGTCAGGAATGAGAAGATTCTAATGTTTTGCCATAACATTGCACCTGTGAGGTTATTTGCTGAATTATTTGAGAAGTTCTTTGGATGGCATAGAGGTCGAGAAGTCTTAGTTCTGACTGGGGAGCTAGAGCTCTTTGAACGTGGAAGGATAATGGATAAGTTTGAGGATCCTAATGGAGCATCAAAGATACTTCTTGCTTCAATTTCATCTTGTGCTGAAGGCATTAGTTTGACAGCAGCCTCTCGGGTGATTTTGTTGGATTCGGAATGGAATCCATCCAAGACAAAACAGGCTGTTGCACGTGCTTTTCGTCCTGGTCAGCAAAAGATGGTTTATGTGTACCAACTGCTGGCAACAGGCACATTGGAGGAAGATAAGTATAAAAGAACCACCTGGAAAGAGTGGGTTTCCAGCATGATTTTTAGTGAAGAATTTGTGCAGGACCCTTCCCGATGGCGAAAAGAAAAGATTGAAGATGATATACTGCGAGAAATGGTTGCGGAAGACCGCTCCAATTCATTCCGTATGATTATGAAGAATGAAAAGGCGTCCACAAACTAA | 3900 | 0.3951 | MRKKRRLHQLKHPFDSYPFEAILHGSWQALRCIAIEGGTMVLHFKDNNHVVREKAPISDIRIRSRKATVSDCSCFLRPGIDICVLSSFQHANGSDQNNLNAVWADAKISSIQRKPHEPGCSCRYYVNIYVNQGCIGSEVRTLSKEIKEVGIDQISVLQRLEHSPCEDQHYRWDSSEDWHAVPQTRLLSGKFLSDISWLIVSSVLKKVSFCVRSAGNKIVYQIIGGDDNSSILDVVNFRVDNSMLVPIVSQVISSDTDKVDNRDDSHKDKAFPSYSPDGLRRSKRRNVQPERYLGCDVTHVLDVGFVRTRPYKMDTRKDDTEDDELSMPLSSLIGLQKCSGVKHDDSGLKFDNMKSYNKLKVYKRRPKSKEVNSGDADKNESQSQLAIVPVPQECDPINIEHFDSNAKVSKHHTQRNVEFPNKYYHLMGSPEPKTNDMDLLTFESHNHPSKIPDLEDCVEERGDIASRCHYNHGTPKLKRKNSLGFDDTDFEGRWEGINSNKAAVQGRKYYSTISSRQSDEERTYKARSLSAGAYKELIDSYLKNMNAKPSKAEPPITEQWMQFKETSNLGQKSETKAPQMEDEEETDELDMLWREMEVSLASSYVEEDTEGSSAAVFTETMEKPDSLCCHDYRMNEEVGIYCLLCGIVSTEIKDILPPFLERSMWHYEEKQHSGEGSEPEPKADENDGFHLFFTDALPDQPITGENDNVWALIPELRWKLHVHQKRAFEFLWKNIAGSMDPTLMEAASKKRGGCVISHSPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWKIPIPVYLIHGRRTYRAFKQNTVAFNGGPKPTDDVKHILDCLEKIQKWHTHPSVLVMGYTSFLTLMREDSKFSHRKYMAKVLRESPGILILDEGHNPRSTKSRLRKVLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFAFEVLKKLDPKYKRKMKGRGKARHLIESRARKFFLDTIAKKVDSKDKKEQMQGLNMLRKMTSGFIDVYENGNSEDLPGLQIYTLVMNTTDIQHEILSKLQKKMSACSGYPLELELLITLGSIHPWLVKTAVCAEKFFSIDQLMELEKWKYDLKKGSKVKFVLSLVYRVVRNEKILMFCHNIAPVRLFAELFEKFFGWHRGREVLVLTGELELFERGRIMDKFEDPNGASKILLASISSCAEGISLTAASRVILLDSEWNPSKTKQAVARAFRPGQQKMVYVYQLLATGTLEEDKYKRTTWKEWVSSMIFSEEFVQDPSRWRKEKIEDDILREMVAEDRSNSFRMIMKNEKASTN | 1299 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral313g00007 | 1299 | Pfam | SNF2-related domain | 720 | 996 | IPR000330 | GO:0005524|GO:0140658 | |
| Pral313g00007 | 1299 | PANTHER | SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED | 51 | 1298 | IPR044567 | GO:0080188 | |
| Pral313g00007 | 1299 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 745 | 944 | IPR014001 | - | |
| Pral313g00007 | 1299 | CDD | DEXHc_ATRX-like | 720 | 959 | - | - | |
| Pral313g00007 | 1299 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1105 | 1266 | IPR001650 | - | |
| Pral313g00007 | 1299 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1020 | 1278 | IPR027417 | - | |
| Pral313g00007 | 1299 | SMART | helicmild6 | 1130 | 1219 | IPR001650 | - | |
| Pral313g00007 | 1299 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 696 | 946 | IPR027417 | - | |
| Pral313g00007 | 1299 | CDD | SF2_C_SNF | 1094 | 1230 | - | - | |
| Pral313g00007 | 1299 | SMART | ultradead3 | 716 | 960 | IPR014001 | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral313g00007 | K10875 | - | gmx:100811703 | 1742.24 |
Showing 1 to 1 of 1 entries