Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3135g00002 ATGATGGGATCATCATCAAAACCAATTATTAGAGTTCCCGAATTTCTCATCATCTTCTTCATAATTGTTCTGATCATCAGTTTCATCAGAATAAGTACTTCTCAGGGACCAACCTTCGTTGGAGATGACTGCCATAACAGATCTCAACAAGTCCTTACAGCGTCCTACAAAGCCAACCTTAACCAGCTCCTCTCATGGCTCTCCACTGACGCAGCCACAAGCAAAGGCTACAACCATACCTCCATCGGCACCGCCACCAATGCCGTCTACGGCCTCTATGACTGTCGCGGTGATGACGCCGGATACTTCTGCCAGTTCTGTGTCTCCACTGCCACTAGAGAGGTTCTTCAACGTTGCCCCAGTCAATCTTCCGCCGTGATATGGTATGACTTCTGCATCCTCCGGTACTCTAACAAGAACTTCTTTGGGAACGTGACAACAAGCCCGTGGTGGTATGCTGCCGGATCAAAGACGGTATCAGATCTGACGGAGGGGAAGAAGGCGGAGAGTTTCATGAGGGGTCTAATCGTAAAGGCGATGGAGAACACGACGGAGTTGGGCTCCAGGGGAGAGTTTGATTTGGGTGGTGGGAAAAAAAGGTATGCATTGGTTCAGTGTAGTAGAGACCTTAATACACAAGGTTGTAGACGATGTTTGGAGGCTATGGTGGACAAGGTTGCCCAGTGTTGTGAGCAGAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTAATTAAGTACGATGATTACATGTTCTATCAGGCATCCTCTTCTCCAAATCCTAATTCTCCCACAGCCCATGACGGTGATAGCAAGTCAAAAGTCATTATCATAAGCGTAAGTCTATCAGTGGCCATAGCTATATTAAGCTTCTCTATCTTCATCTTCTGGCGGACGAGGACTTCTAGAAAAGATGATATGCCGTTGGAGAGCACTCCAATCTTTTACAATCTATCTGAAAGAGAGACTTCATTGAACACAGACCTTCCCACAATCCCTTTACCTGTGATTCAACGGAGTACCCATCAATTTTCAGAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCACAAAGTTCAGGTCAAGGCTCAGAAGAGTTCAAAAATGAAGTGATATTCATAGCAAAATTGCAACATAGAAATCTTGTCAGACTCTTGGCTTATTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTATCTGCCTAATTCTAGCCTTGATTTCCAGCTTTTTGATGAAGAGAACAGAAAAAAATTAGGTTGGAAGCAAAGGCTAAATATTATTAATGGAATTGCAAGAGGACTTTCATATCTCCACGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGCAATGTCCTTTTGGACTATGAGATGAATCCTAAAATATCAGATTTTGGATTAGCAAGAACTTTTGAAGGAGCACCAAGTCAAGGAATAAACACCGGCAGAATAATGGGCACTTATGGATATATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTGAAATCAGATGTTTTTAGCTTTGGAGTTCTTCTTCTTGAAATCATATGTGGAAAAAGGGTTAGATCTTTCCATTTCTCTGAACATCAGCAAAGTCTTCTAATTTATACATGGAGTCTATGGTGTGATGGAAAATGTTTGGAACTCATGGATCCAATGCTGAAAGATTCATACATAGAAAGTGAAGTTTTGAAGTGCATACACATCGGTTTACTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACCATGTCCACTGTTCTAGTCATGCTCGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCAATTGGAGGAATAAGCCATGAAGATTCATCTACCTCAAAAAATTCCAAAGATCCTTCCATTAATAAGGTAACAGTGTCTCACATAATGCCAAGGTGA 1992 0.4202 MMGSSSKPIIRVPEFLIIFFIIVLIISFIRISTSQGPTFVGDDCHNRSQQVLTASYKANLNQLLSWLSTDAATSKGYNHTSIGTATNAVYGLYDCRGDDAGYFCQFCVSTATREVLQRCPSQSSAVIWYDFCILRYSNKNFFGNVTTSPWWYAAGSKTVSDLTEGKKAESFMRGLIVKAMENTTELGSRGEFDLGGGKKRYALVQCSRDLNTQGCRRCLEAMVDKVAQCCEQKLGWQVLAPSCLIKYDDYMFYQASSSPNPNSPTAHDGDSKSKVIIISVSLSVAIAILSFSIFIFWRTRTSRKDDMPLESTPIFYNLSERETSLNTDLPTIPLPVIQRSTHQFSEASKLGEGGFGPVYKGTLPDGREIAVKRLSQSSGQGSEEFKNEVIFIAKLQHRNLVRLLAYCIEENEKLLIYEYLPNSSLDFQLFDEENRKKLGWKQRLNIINGIARGLSYLHEDSRLRVIHRDLKASNVLLDYEMNPKISDFGLARTFEGAPSQGINTGRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSEHQQSLLIYTWSLWCDGKCLELMDPMLKDSYIESEVLKCIHIGLLCVQEDAKDRPTMSTVLVMLASDTMTFPKPNHPAFSIGGISHEDSSTSKNSKDPSINKVTVSHIMPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3135g00002 663 FunFam Cysteine-rich receptor-like protein kinase 28 40 140 - -
Pral3135g00002 663 SUPERFAMILY Protein kinase-like (PK-like) 329 643 IPR011009 -
Pral3135g00002 663 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Pral3135g00002 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 314 419 - -
Pral3135g00002 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pral3135g00002 663 SMART serkin_6 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3135g00002 663 MobiDBLite consensus disorder prediction 636 654 - -
Pral3135g00002 663 CDD STKc_IRAK 350 616 - -
Pral3135g00002 663 Pfam Protein tyrosine and serine/threonine kinase 348 613 IPR001245 GO:0004672|GO:0006468
Pral3135g00002 663 FunFam Liguleless narrow1 420 624 - -
Pral3135g00002 663 Gene3D Phosphorylase Kinase; domain 1 314 419 - -
Pral3135g00002 663 ProSiteProfiles Protein kinase domain profile. 344 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3135g00002 663 Gene3D Transferase(Phosphotransferase) domain 1 420 625 - -
Pral3135g00002 663 ProSiteProfiles Gnk2-homologous domain profile. 38 141 IPR002902 -
Pral3135g00002 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 659 - -
Pral3135g00002 663 Pfam Salt stress response/antifungal 191 250 IPR002902 -
Pral3135g00002 663 Pfam Salt stress response/antifungal 44 138 IPR002902 -
Pral3135g00002 663 MobiDBLite consensus disorder prediction 634 663 - -
Pral3135g00002 663 Gene3D - 155 252 IPR038408 -
Pral3135g00002 663 Gene3D - 38 141 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3135g00002 Pral-Chr3135 157844 165956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3135g00002 12 663 Receptor kinase-like Gene Family AT4G05200 39.531 1.31e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3135g00002 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3135g00002 - - gmx:100796972 820.461