Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3135g00001 ATGATGGGATCATCATCAAAACCAATTATTAGAGTTCCCGAATTTCTCATCATCTTCTTCATAATTGTTCTGATCATCAGTTTCATCAGAATAAGTACTTCTCAGGGACCAACCTTCGTTGGAGATGACTGCCATAACAGATCTCAACAAGTCCTTACAGCGTCCTACAAAGCCAACCTTAACCAGCTCCTCTCATGGCTCTCCACTGACGCAGCCACAAGCAAAGGCTACAACCATACCTCCATCGGCACCGCCACCAATGCCGTCTACGGCCTCTATGACTGTCGCGGTGATGACGCCGGATACTTCTGCCAGTTCTGTGTCTCCACTGCCACTAGAGAGGTTCTTCAACGTTGCCCCAGTCAATCTTCCGCCGTGATATGGTATGACTTCTGCATCCTCCGGTACTCTAACAAGAACTTCTTTGGGAACGTGACAACAAGCCCGTGGTGGTATGCTGCCGGATCAAAGACGGTATCAGATCTGACGGAGGGGAAGAAGGCGGAGAGTTTCATGAGGGGTCTAATCGTAAAGGCGATGGAGAACACGACGGAGTTGGGCTCCAGGGGAGAGTTTGATTTGGGTGGTGGGAAAAAAAGGTATGCATTGGTTCAGTGTAGTAGAGACCTTAATACACAAGGTTGTAGACGATGTTTGGAGGCTATGGTGGACAAGGTTGCCCAGTGTTGTGAGCAGAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTAATTAAGTACGATGATTACATGTTCTATCAGGCATCCTCTTCTCCAAATCCTAATTCTCCCACAGCCCATGACGGTGATAGCAAGTCAAAAGTCATTATCATAAGCGTAAGTCTATCAGTGGCCATAGCTATATTAAGCTTCTCTATCTTCATCTTCTGGCGGACGAGGACTTCTAGAAAAGACCTTCCCACAATCCCTTTACCTGTGATTCAACGGAGTACCCATCAATTTTCAGAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCACAAAGTTCAGGTCAAGGCTCAGAAGAGTTCAAAAATGAAGTGATATTCATAGCAAAATTGCAACATAGAAATCTTGTCAGACTCTTGGCTTATTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTATCTGCCTAATTCTAGCCTTGATTTCCAGCTTTTTGATGAAGAGAACAGAAAAAAATTAGGTTGGAAGCAAAGGCTAAATATTATTAATGGAATTGCAAGAGGACTTTCATATCTCCACGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGCAATGTCCTTTTGGACTATGAGATGAATCCTAAAATATCAGATTTTGGATTAGCAAGAACTTTTGAAGGAGCACCAAGTCAAGGAATAAACACCGGCAGAATAATGGGCACTTATGGATATATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTGAAATCAGATGTTTTTAGCTTTGGAGTTCTTCTTCTTGAAATCATATGTGGAAAAAGGGTTAGATCTTTCCATTTCTCTGAACATCAGCAAAGTCTTCTAATTTATACATGGAGTCTATGGTGTGATGGAAAATGTTTGGAACTCATGGATCCAATGCTGAAAGATTCATACATAGAAAGTGAAGTTTTGAAGTGCATACACATCGGTTTACTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACCATGTCCACTGTTCTAGTCATGCTCGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCAATTGGAGGAATAAGCCATGAAGATTCATCTACCTCAAAAAATTCCAAAGATCCTTCCATTAATAAGGTAACAGTGTCTCACATAATGCCAAGGTGA 1923 0.4212 MMGSSSKPIIRVPEFLIIFFIIVLIISFIRISTSQGPTFVGDDCHNRSQQVLTASYKANLNQLLSWLSTDAATSKGYNHTSIGTATNAVYGLYDCRGDDAGYFCQFCVSTATREVLQRCPSQSSAVIWYDFCILRYSNKNFFGNVTTSPWWYAAGSKTVSDLTEGKKAESFMRGLIVKAMENTTELGSRGEFDLGGGKKRYALVQCSRDLNTQGCRRCLEAMVDKVAQCCEQKLGWQVLAPSCLIKYDDYMFYQASSSPNPNSPTAHDGDSKSKVIIISVSLSVAIAILSFSIFIFWRTRTSRKDLPTIPLPVIQRSTHQFSEASKLGEGGFGPVYKGTLPDGREIAVKRLSQSSGQGSEEFKNEVIFIAKLQHRNLVRLLAYCIEENEKLLIYEYLPNSSLDFQLFDEENRKKLGWKQRLNIINGIARGLSYLHEDSRLRVIHRDLKASNVLLDYEMNPKISDFGLARTFEGAPSQGINTGRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSEHQQSLLIYTWSLWCDGKCLELMDPMLKDSYIESEVLKCIHIGLLCVQEDAKDRPTMSTVLVMLASDTMTFPKPNHPAFSIGGISHEDSSTSKNSKDPSINKVTVSHIMPR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3135g00001 640 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Pral3135g00001 640 Gene3D Phosphorylase Kinase; domain 1 295 396 - -
Pral3135g00001 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Pral3135g00001 640 Gene3D - 155 252 IPR038408 -
Pral3135g00001 640 Gene3D - 38 141 IPR038408 -
Pral3135g00001 640 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 294 396 - -
Pral3135g00001 640 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 636 - -
Pral3135g00001 640 Pfam Salt stress response/antifungal 191 250 IPR002902 -
Pral3135g00001 640 Pfam Salt stress response/antifungal 44 138 IPR002902 -
Pral3135g00001 640 Gene3D Transferase(Phosphotransferase) domain 1 397 602 - -
Pral3135g00001 640 FunFam Cysteine-rich receptor-like protein kinase 28 40 140 - -
Pral3135g00001 640 MobiDBLite consensus disorder prediction 611 640 - -
Pral3135g00001 640 ProSiteProfiles Gnk2-homologous domain profile. 38 141 IPR002902 -
Pral3135g00001 640 SMART serkin_6 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3135g00001 640 CDD STKc_IRAK 327 593 - -
Pral3135g00001 640 FunFam Liguleless narrow1 397 601 - -
Pral3135g00001 640 Pfam Protein tyrosine and serine/threonine kinase 325 590 IPR001245 GO:0004672|GO:0006468
Pral3135g00001 640 MobiDBLite consensus disorder prediction 613 631 - -
Pral3135g00001 640 ProSiteProfiles Protein kinase domain profile. 321 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3135g00001 640 SUPERFAMILY Protein kinase-like (PK-like) 307 620 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3135g00001 Pral-Chr3135 157843 165956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3135g00001 12 640 Receptor kinase-like Gene Family AT4G05200 40.325 6.97e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3135g00001 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3135g00001 - - gmx:100796972 801.971