Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3127g00005 ATGGTCTACTCTTCTCTTCCAATCTATCACCTAGATCCACCACCCAACTGGCATCACCAGCCAGAAGGGTTTATTCATGCCCAGAATTCCCCGGTTCCGCCTTCACCTCCGCCACCACCGCCTCCACCTGTCGGAGACGGTGATTGTGGTGGCAACAAAGGCTCGACCACGAGGCCAGGATCCATGGCGGATCGAGCTCGGCTAGCGAAGGTAGCACAGCCAGAAACAGCACTGAAATGTCCGCGGTGTGAATCCACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCTCGTTGAGGAACGTGCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGGAGCTAACATCAGGTCATCAAAATCTCCCAACAACAAAGTAGCATCTACATCAGGTTCCATTATTTCCAACTCTTCTGCAAGTGCAAATAATTCCTCAAGTAACTGTTGCCCTAATAGCGATCATCATCATCATCATAACTTGATAGGTCATCGCTTACCGCCTCCATTTCTCTTCCCTCCTCCTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAAACATGCTGATGAATTTCAAATTGCTTGTAATAATAATTCTACTAGCTCAGGTGGTATAATTGGAAATAATAATAACAACAATGGCTTTGTTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAGCAACATTCTTGAGTAATTTGGAGGCACCAGTAGGGTTATATCAGTTTGAAAGATCAGAGAACGTTGAGATCCAACCTTCAAGGACATTATTATATTCTGGTGCTACTACAGTTAAAATGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAATCTTACGGGAAACTCAGAAAATAATAATCAACAATTCTGGCAAGCAAATAATGGCAGCAGCGCATGGAAAAGCAACAATGTTTCTATTAGTTTTGCTTCTTCTTCCACCAACCATCTCCTGTGA 1074 0.4507 MVYSSLPIYHLDPPPNWHHQPEGFIHAQNSPVPPSPPPPPPPPVGDGDCGGNKGSTTRPGSMADRARLAKVAQPETALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRKNKRSKGANIRSSKSPNNKVASTSGSIISNSSASANNSSSNCCPNSDHHHHHNLIGHRLPPPFLFPPPTSHSYSDYDVVFGATNIKHADEFQIACNNNSTSSGGIIGNNNNNNGFVTTEQWKLPSLLQHHQQFPAATFLSNLEAPVGLYQFERSENVEIQPSRTLLYSGATTVKMEENMDQVVGLSKNLTGNSENNNQQFWQANNGSSAWKSNNVSISFASSSTNHLL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3127g00005 357 MobiDBLite consensus disorder prediction 17 63 - -
Pral3127g00005 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 275 IPR045174 GO:0003700|GO:0006355
Pral3127g00005 357 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Pral3127g00005 357 MobiDBLite consensus disorder prediction 30 46 - -
Pral3127g00005 357 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Pral3127g00005 357 MobiDBLite consensus disorder prediction 138 162 - -
Pral3127g00005 357 MobiDBLite consensus disorder prediction 122 162 - -
Pral3127g00005 357 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3127g00005 Pral-Chr3127 200827 202824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3127g00005 58 135 C2C2-Dof Transcription Factor Family AT2G37590 84.615 1.21e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3127g00005 zf-Dof 5.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3127g00005 - - pcin:129293462 434.876