Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3127g00004 ATGGTCTACTCTTCTCTTCCAATCTATCACCTAGATCCACCACCCAACTGGCATCACCAGCAGCCAGAAGGGTTTATTCATGCCCAGAATTCCCCGGTTCCGCCTTCACCTCCGCCACCACCGCCTCCACCTGTCGGAGACGGTGATTGTGGTGGCAACAAAGGCTCGACCACGAGGCCAGGATCCATGGCGGATCGAGCTCGGCTAGCGAAGGTAGCACAGCCAGAAACAGCACTGAAATGTCCGCGGTGTGAATCCACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCTCGTTGAGGAACGTGCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGGAGCTAACATCAGGTCATCAAAATCTCCCAACAACAAAGTAGCATCTACATCAGGTTCCATTATTTCCAACTCTTCTGCAAGTGCAAATAATTCCTCAAGTAACTGTTGCCCTAATAGCGATCATCATCATCATCATAACTTGATAGGTCATCGCTTACCGCCTCCATTTCTCTTCCCTCCTCCTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAAACATGCTGATGAATTTCAAATTGCTTGTAATAATAATTCTACTAGCTCAGGTGGTATAATTGGAAATAATAATAACAACAATGGCTTTGTTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAGCAACATTCTTGAGTAATTTGGAGGCACCAGTAGGGTTATATCAGTTTGAAAGATCAGAGAACGTTGAGATCCAACCTTCAAGGACATTATTATATTCTGGTGCTACTACAGTTAAAATGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAATCTTACGGGAAACTCAGAAAATAATAATCAACAATTCTGGCAAGCAAATAATGGCAGCAGCGCATGGAAAAGCAACAATGTTTCTATTAGTTTTGCTTCTTCTTCCACCAACCATCTCCTGTGA 1077 0.4513 MVYSSLPIYHLDPPPNWHHQQPEGFIHAQNSPVPPSPPPPPPPPVGDGDCGGNKGSTTRPGSMADRARLAKVAQPETALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRKNKRSKGANIRSSKSPNNKVASTSGSIISNSSASANNSSSNCCPNSDHHHHHNLIGHRLPPPFLFPPPTSHSYSDYDVVFGATNIKHADEFQIACNNNSTSSGGIIGNNNNNNGFVTTEQWKLPSLLQHHQQFPAATFLSNLEAPVGLYQFERSENVEIQPSRTLLYSGATTVKMEENMDQVVGLSKNLTGNSENNNQQFWQANNGSSAWKSNNVSISFASSSTNHLL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3127g00004 358 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Pral3127g00004 358 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Pral3127g00004 358 MobiDBLite consensus disorder prediction 31 47 - -
Pral3127g00004 358 MobiDBLite consensus disorder prediction 139 163 - -
Pral3127g00004 358 MobiDBLite consensus disorder prediction 12 64 - -
Pral3127g00004 358 MobiDBLite consensus disorder prediction 124 163 - -
Pral3127g00004 358 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Pral3127g00004 358 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 276 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3127g00004 Pral-Chr3127 200827 202824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3127g00004 59 136 C2C2-Dof Transcription Factor Family AT2G37590 84.615 1.22e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3127g00004 zf-Dof 5.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3127g00004 - - pcin:129293462 436.802