Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3127g00002 ATGGTCTACTCTTCTCTTCCAATCTATCACCTAGATCCACCACCCAACTGGCATCACCAGCAGCTTGATCAGCAGCCAGAAGGGTTTATTCATGCCCAGAATTCCCCGGTTCCGCCTTCACCTCCGCCACCACCGCCTCCACCTGTCGGAGACGGTGATTGTGGTGGCAACAAAGGCTCGACCACGAGGCCAGGATCCATGGCGGATCGAGCTCGGCTAGCGAAGGTAGCACAGCCAGAAACAGCACTGAAATGTCCGCGGTGTGAATCCACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCTCGTTGAGGAACGTGCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGGAGCTAACATCAGGTCATCAAAATCTCCCAACAACAAAGTAGCATCTACATCAGGTCATCGCTTACCGCCTCCATTTCTCTTCCCTCCTCCTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAAACATGCTGATGAATTTCAAATTGCTTGTAATAATAATTCTACTAGCTCAGGTGGTATAATTGGAAATAATAATAACAACAATGGCTTTGTTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAGCAACATTCTTGAGTAATTTGGAGGCACCAGTAGGGTTATATCAGTTTGAAAGATCAGAGAACGTTGAGATCCAACCTTCAAGGACATTATTATATTCTGGTGCTACTACAGTTAAAATGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAATCTTACGGGAAACTCAGAAAATAATAATCAACAATTCTGGCAAGCAAATAATGGCAGCAGCGCATGGAAAAGCAACAATGTTTCTATTAGTTTTGCTTCTTCTTCCACCAACCATCTCCTGTGA 996 0.4598 MVYSSLPIYHLDPPPNWHHQQLDQQPEGFIHAQNSPVPPSPPPPPPPPVGDGDCGGNKGSTTRPGSMADRARLAKVAQPETALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRKNKRSKGANIRSSKSPNNKVASTSGHRLPPPFLFPPPTSHSYSDYDVVFGATNIKHADEFQIACNNNSTSSGGIIGNNNNNNGFVTTEQWKLPSLLQHHQQFPAATFLSNLEAPVGLYQFERSENVEIQPSRTLLYSGATTVKMEENMDQVVGLSKNLTGNSENNNQQFWQANNGSSAWKSNNVSISFASSSTNHLL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3127g00002 331 MobiDBLite consensus disorder prediction 35 51 - -
Pral3127g00002 331 MobiDBLite consensus disorder prediction 128 164 - -
Pral3127g00002 331 ProSiteProfiles Zinc finger Dof-type profile. 83 137 IPR003851 GO:0003677|GO:0006355
Pral3127g00002 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 70 303 IPR045174 GO:0003700|GO:0006355
Pral3127g00002 331 MobiDBLite consensus disorder prediction 11 70 - -
Pral3127g00002 331 Pfam Dof domain, zinc finger 82 137 IPR003851 GO:0003677|GO:0006355
Pral3127g00002 331 MobiDBLite consensus disorder prediction 143 158 - -
Pral3127g00002 331 ProSitePatterns Zinc finger Dof-type signature. 85 121 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3127g00002 Pral-Chr3127 200827 202824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3127g00002 63 140 C2C2-Dof Transcription Factor Family AT2G37590 84.615 8.98e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3127g00002 zf-Dof 4.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3127g00002 - - pcin:129293462 466.077