Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3127g00001 ATGGTCTACTCTTCTCTTCCAATCTATCACCTAGATCCACCACCCAACTGGCATCACCAGCAGCTTGATCAGCAGCCAGAAGGGTTTATTCATGCCCAGAATTCCCCGGTTCCGCCTTCACCTCCGCCACCACCGCCTCCACCTGTCGGAGACGGTGATTGTGGTGGCAACAAAGGCTCGACCACGAGGCCAGGATCCATGGCGGATCGAGCTCGGCTAGCGAAGGTAGCACAGCCAGAAACAGCACTGAAATGTCCGCGGTGTGAATCCACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACTTGCCGGCGATACTGGACCCGAGGCGGCTCGTTGAGGAACGTGCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGGAGCTAACATCAGGTCATCAAAATCTCCCAACAACAAAGTAGCATCTACATCAGGTTCCATTATTTCCAACTCTTCTGCAAGTGCAAATAATTCCTCAAGTAACTGTTGCCCTAATAGCGATCATCATCATCATCATAACTTGATAGGTCATCGCTTACCGCCTCCATTTCTCTTCCCTCCTCCTACATCTCATAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAAACATGCTGATGAATTTCAAATTGCTTGTAATAATAATTCTACTAGCTCAGGTGGTATAATTGGAAATAATAATAACAACAATGGCTTTGTTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAGCAACATTCTTGAGTAATTTGGAGGCACCAGTAGGGTTATATCAGTTTGAAAGATCAGAGAACGTTGAGATCCAACCTTCAAGGACATTATTATATTCTGGTGCTACTACAGTTAAAATGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAATCTTACGGGAAACTCAGAAAATAATAATCAACAATTCTGGCAAGCAAATAATGGCAGCAGCGCATGGAAAAGCAACAATGTTTCTATTAGTTTTGCTTCTTCTTCCACCAACCATCTCCTGTGA 1089 0.4518 MVYSSLPIYHLDPPPNWHHQQLDQQPEGFIHAQNSPVPPSPPPPPPPPVGDGDCGGNKGSTTRPGSMADRARLAKVAQPETALKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRKNKRSKGANIRSSKSPNNKVASTSGSIISNSSASANNSSSNCCPNSDHHHHHNLIGHRLPPPFLFPPPTSHSYSDYDVVFGATNIKHADEFQIACNNNSTSSGGIIGNNNNNNGFVTTEQWKLPSLLQHHQQFPAATFLSNLEAPVGLYQFERSENVEIQPSRTLLYSGATTVKMEENMDQVVGLSKNLTGNSENNNQQFWQANNGSSAWKSNNVSISFASSSTNHLL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3127g00001 362 MobiDBLite consensus disorder prediction 11 68 - -
Pral3127g00001 362 MobiDBLite consensus disorder prediction 35 51 - -
Pral3127g00001 362 Pfam Dof domain, zinc finger 82 137 IPR003851 GO:0003677|GO:0006355
Pral3127g00001 362 MobiDBLite consensus disorder prediction 143 167 - -
Pral3127g00001 362 ProSiteProfiles Zinc finger Dof-type profile. 83 137 IPR003851 GO:0003677|GO:0006355
Pral3127g00001 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 71 280 IPR045174 GO:0003700|GO:0006355
Pral3127g00001 362 MobiDBLite consensus disorder prediction 128 167 - -
Pral3127g00001 362 ProSitePatterns Zinc finger Dof-type signature. 85 121 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3127g00001 Pral-Chr3127 200827 202824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3127g00001 63 140 C2C2-Dof Transcription Factor Family AT2G37590 84.615 1.21e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3127g00001 zf-Dof 5.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3127g00001 - - pcin:129293462 448.358