Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3119g00002 ATGGGTGGTGGTGTGGGTGATGGGTTTGTGTATGTTTGGGGTGAGCTTTTTATTGACAAGAGAGGAAGGGAGAGTGAAACCGCACCCACCACCATCACCACCGCTGCCACCGCCACTCCTTGCCCAACATCTACTAATACCACCAAAACTCACTCTGCTCGCAAATGTAAAGGAAAAGGTGGACCCGACAACAACAAATTTAGGTACCGTGGTGTGAGGCAGCGAAGCTGGGGCAAATGGGTCGCTGAGATCCGAGAGCCTCGCAAGCGAACCCGAAAGTGGCTCGGCACCTTCGCCACCGCCGAGGACGCCGCTCGAGCCTACGACCGCGCAGCTATCATCCTCTACGGCTCTAGGGCTCAGCTCAATTTACAACCCTCCGCCGCCTCTTCTTCCCACTCTTCCGCCTCTCGGGCTTCTACGCCTTCTTCTTCTTCTCAAACCCTTCGTCCCTTGCTTCCCCGCCCCTCTGGCCTTAGCTTCGCCTTTTCTTCTGCCGCCACATCGGGTTTCTTACCCTACGGGGTTTACCCCAATAATACTAATTATATCCCGCAAATGATATGCCCGGTGAATAATAATGTGGCGCAACAGCATCGTCAAGTGGTGCAACTTCCACAGAAATCGCATCGCCACTCCCCAGAATCTGATGGAAATATTGTCGAGAACTCCAACACGGCAGCCTCGTACCAGGATCAGCTGGTGCAGCAGCATCAGAATTGCATGCACGACGATATTAGTTCTCTCGTGAGTTCGGATGGGTCAGGTTTGTGTGCCTCGCAGACACAGACTGTAGTTGCACCTGCGGATCCGTGGCCGCTGACGAATGAGGAAGAGTACACACCAAGTCTATGGGACTACTATAACGATCCTTTCTTCTTTGATTTTTAA 891 0.5297 MGGGVGDGFVYVWGELFIDKRGRESETAPTTITTAATATPCPTSTNTTKTHSARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSAASSSHSSASRASTPSSSSQTLRPLLPRPSGLSFAFSSAATSGFLPYGVYPNNTNYIPQMICPVNNNVAQQHRQVVQLPQKSHRHSPESDGNIVENSNTAASYQDQLVQQHQNCMHDDISSLVSSDGSGLCASQTQTVVAPADPWPLTNEEEYTPSLWDYYNDPFFFDF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3119g00002 296 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Pral3119g00002 296 MobiDBLite consensus disorder prediction 28 51 - -
Pral3119g00002 296 MobiDBLite consensus disorder prediction 28 68 - -
Pral3119g00002 296 Pfam AP2 domain 68 116 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 36 245 - -
Pral3119g00002 296 MobiDBLite consensus disorder prediction 127 151 - -
Pral3119g00002 296 FunFam Ethylene-responsive transcription factor 2 68 126 - -
Pral3119g00002 296 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 CDD AP2 68 125 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Pral3119g00002 296 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3119g00002 Pral-Chr3119 6981 14076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3119g00002 54 296 AP2-EREBP Transcription Factor Family AT2G40220 45.392 4.18e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3119g00002 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3119g00002 K09286 - jre:108991752 235.728