Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3117g00010 ATGGACGGTAATAAGGATGAAGCTCATAGGTGTATTCGCATCGCTGAGGAGGCGATTGCAACAGGGAACAAAGAGCGTGCCCTAAAATTTATCAAAATTGCACAGCGGCTGAATAACAATCTGTCAGTGGATGAGTTACTTACCATGTGTTCTAGCCTTGGTTCTCAATCATCTACGCCTTCTAGGGATGAAAACGGTGTCCATCAGATTAAAAGGGAGAACAGTTCAAAACGAAGTGATGATGGATTGAATGGGGAGAGAAATTATACAGAAGAACATGTTCAGTTGATTAGGGAGATCAAGGGGAAGAACGATTATTATGCCATTCTTGGTGTGGAGAAGACTTGTTCTGTTGAGGAGATTAGGCGGGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGATAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTCAAGTGTTTAAGTGATGATGGTTCAAGGAGGCAGTATGATCAGACAGGGCTGGTCGAGGAGTTTGAATACAACCAGCAGCACAATGTTAGGCGTAGAAGAGGAAGGACAACTACACGTGACTTTTTTAATGATGACATTGATCCTGATGAGATATTTAGGGCATTCTTTGGAGAAGCTGATTTGTTTGGGAGGGCTCATGTTTACCGGACAAGGGGAATGGGCGGTCACCAGCGGCAAGAATTTCGAGGTGGAGGGCTCAATGTTATGCTCCTTCTGCAAATTGTACCGTTCTTGATAGTATTTCTTCTTGCATACTTGCCATTTTCCGAACCCGACTATTCTTTGCATAAGAGTTACTCATATCAGATTCCCAAGACAACAGAGAAGTATGGGACTCAGTTTTTTGTGAAATCTGAATCATTTGAAGCCAAATATCCACGAGGAAGTGCTGCCCGTGCAAACATTGAAGGCAATGTGATACATGATCACAAGAACTTGCTTCGTCGCTACTGTCAAATAGAACTCCAGAGGCGTAGTTGGAATAGGAATCTACCAACTCCTCACTGTGAAAAGCTTCAGAAGCTTGGCGTAGCTTGA 1056 0.4309 MDGNKDEAHRCIRIAEEAIATGNKERALKFIKIAQRLNNNLSVDELLTMCSSLGSQSSTPSRDENGVHQIKRENSSKRSDDGLNGERNYTEEHVQLIREIKGKNDYYAILGVEKTCSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEEFEYNQQHNVRRRRGRTTTRDFFNDDIDPDEIFRAFFGEADLFGRAHVYRTRGMGGHQRQEFRGGGLNVMLLLQIVPFLIVFLLAYLPFSEPDYSLHKSYSYQIPKTTEKYGTQFFVKSESFEAKYPRGSAARANIEGNVIHDHKNLLRRYCQIELQRRSWNRNLPTPHCEKLQKLGVA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3117g00010 351 CDD DnaJ 105 158 IPR001623 -
Pral3117g00010 351 SUPERFAMILY Chaperone J-domain 102 215 IPR036869 -
Pral3117g00010 351 Gene3D DnaJ domain 102 220 IPR036869 -
Pral3117g00010 351 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Pral3117g00010 351 PANTHER AT29763P-RELATED 1 347 - -
Pral3117g00010 351 MobiDBLite consensus disorder prediction 53 87 - -
Pral3117g00010 351 MobiDBLite consensus disorder prediction 65 87 - -
Pral3117g00010 351 SMART dnaj_3 104 161 IPR001623 -
Pral3117g00010 351 PRINTS DnaJ domain signature 141 161 IPR001623 -
Pral3117g00010 351 PRINTS DnaJ domain signature 125 140 IPR001623 -
Pral3117g00010 351 PRINTS DnaJ domain signature 107 125 IPR001623 -
Pral3117g00010 351 Pfam DnaJ domain 105 166 IPR001623 -
Pral3117g00010 351 Pfam Domain of unknown function (DUF1977) 262 332 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3117g00010 Pral-Chr3117 25494 27363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3117g00010 100 166 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 9.91e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3117g00010 K09518 - qsa:O6P43_003572 533.102