Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3113g00002 ATGGCTTCCTTTTTCTTCTCGTTGATTTTCGTTTCTGGTTTGTTATTGTTTCATGCAGAAACAGTGAGATGCACGGCTTCCGACGATAACACCCCGAGTTCACCCGTATCTTGCACGAACTCCTCATCGCAGCACCGTCACAGGTGGACGGGCCCTATCGGTTACCGTGTAATCACCGTGGACTTGAACGGCACCGGGCAATTCATATCAGTGCAAGCTGCCGTCGATTCTGTCCCAGACAACAATCGAATGAACGTCGTCATAAATATCAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGCGACGAAACCATACATAACGTTTCAGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGGGCCAGCGACCCTGGTCCCAACGGACAGCAGCTGCGTACTTACAGAACTGCTTCTGTTACTGTCTTCGCCAACTATTTCTCCGCCAGGAATATCAGCTTTAAGAACACGGCGCCGGCGCCGATGCCGGGAATGCAGGGATGGCAAGCGGCGGCGTTTCGGATATCGGGGGACAAGGCTTATTTCTCAGGATGCGGCTTCTACGGAGCACAAGACACTCTGTGTGACGACGCCGGCCGCCATTATTTCAAGGACTGCTACATCGAGGGTTCCATCGATTTCATCTTCGGCAATGGCCGCTCCATGTACAAGGATTGCGTGGTGCACTCGATAGCGACGAAATTCGGGTCGATAGCGGCCCACAAGAGGAAACACGTGGACGAGAAGACGGGCTTCACATTCGTACGGTGCAGGGTGACGGGTACGGGCCCACTCTATGTAGGCCGGGCCTTGGGCCAGTACTCCAGAATCGTCTACGCTTATACGTATTTCGATGACATTGTTGCGCCCGAAGGTTGGGACGACTGGAACCATGTGGACAACAAAAACAAGACCGTGTTCTTCGGAGTGTACAAGTGCTGGGGCCCGGGAGCCGCGGCGGCGCGTGGGATGTCTCTGGCCCGTGAGTTGGACTTTGAATCCGCCCATCCGTTTCTCGTGAAGAGCTTCGTCAATGGCAGACACTGGATCGCGCCTTCTGATGCTTAA 1080 0.5463 MASFFFSLIFVSGLLLFHAETVRCTASDDNTPSSPVSCTNSSSQHRHRWTGPIGYRVITVDLNGTGQFISVQAAVDSVPDNNRMNVVINISAGYYIEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVVHSIATKFGSIAAHKRKHVDEKTGFTFVRCRVTGTGPLYVGRALGQYSRIVYAYTYFDDIVAPEGWDDWNHVDNKNKTVFFGVYKCWGPGAAAARGMSLARELDFESAHPFLVKSFVNGRHWIAPSDA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3113g00002 359 ProSitePatterns Pectinesterase signature 2. 212 221 IPR033131 -
Pral3113g00002 359 SUPERFAMILY Pectin lyase-like 56 356 IPR011050 -
Pral3113g00002 359 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 355 - -
Pral3113g00002 359 Pfam Pectinesterase 58 350 IPR000070 GO:0030599|GO:0042545
Pral3113g00002 359 FunFam Pectinesterase 54 356 - -
Pral3113g00002 359 Gene3D - 56 358 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3113g00002 Pral-Chr3113 4153 7296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3113g00002 1 359 Carbohydrate Esterase AT5G47500 71.935 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3113g00002 - - cam:101501763 595.504