Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3111g00001 ATGGCTCCCGCCGGAGCCACCGCTCTTCACTCTTCCCTCTGCAGCTTCTCTTCTCACAAACCGTTGTCTCCAAATTCCCTGCAACCAAACACCCAGTTGGGTCCCAAACCCAAAAGCCTCCTCCAAAAGCACCCACTCTATGCTCCAACACACACCAGACTCTCCCTTGAATTCAAAGAAAAAATTCTCTGCCTTGAAATAATGGGTGTTGATTCCGGCAAGGCACTTTCAGTAAACCCTGATCTCAGAACTGCAACCATGGAATCCATCCATTCCATCATCTCCTTCCTTCATTCCAAAGGCATCCAACAGAATGACTTACCCAAGATTCTGGGTATGTGCCCTAAGATTCTCACCTCCAGCATCAAATCTGAGCTTAGCCCAGTTTTTGATTTCCTCTCTCTGGACCTTAAAGTCCCAGATCATAGCTTTAGGAAGGTCATTAACAAATGCCCAAGGTTGCTCACTTCAAGTGTCAAAGACCAGCTCAAGCCAGCTTTGTTCTACCTTCAGAGGCTAGGGTTCAAGAATATGTCAGCCCTGGCTTATCAAGATTCTGTCTTGTTGGTTTCTAATGTAGAAAGGACTCTCATTCCTAAACTGAAGTTTCTGGAGAATCTGGGGTTTTCAAAGGAAGAAACAAAAGATATGGTGTTGAGATGCCCAGCATTGTTGACCTTTAGTATTGACAATAATTTCCAGCCCAAATTTGAGTATTTTGCTGAGGTAATGGGCAGAAAGTTGGAGGAGCTGAAGGAATTTCCTCAGTATTTTGCTTTTAGCTTGGAAAACAGGATAAAGCCTAGGCATATGGAAGTTGTGCAAAGTGGCATCAATATGCCTTTGTCTTTGATGCTTAAGAGTACTGATGATGAATTTAGGGAGCTCATAAAGCAGAAAACTGGATGA 909 0.4378 MAPAGATALHSSLCSFSSHKPLSPNSLQPNTQLGPKPKSLLQKHPLYAPTHTRLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIISFLHSKGIQQNDLPKILGMCPKILTSSIKSELSPVFDFLSLDLKVPDHSFRKVINKCPRLLTSSVKDQLKPALFYLQRLGFKNMSALAYQDSVLLVSNVERTLIPKLKFLENLGFSKEETKDMVLRCPALLTFSIDNNFQPKFEYFAEVMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGINMPLSLMLKSTDDEFRELIKQKTG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3111g00001 302 MobiDBLite consensus disorder prediction 20 37 - -
Pral3111g00001 302 MobiDBLite consensus disorder prediction 20 42 - -
Pral3111g00001 302 FunFam Transcription termination factor MTEF1, chloroplastic 133 301 - -
Pral3111g00001 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 Pfam mTERF 74 177 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 PANTHER CGI-12 PROTEIN-RELATED 32 298 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 Gene3D Transcription termination factor 3, mitochondrial 124 301 IPR038538 -
Pral3111g00001 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Pral3111g00001 302 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3111g00001 Pral-Chr3111 1006 2234 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral3111g00001 mTERF 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3111g00001 K15031 - gmx:100788221 468.388