Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3108g00003 ATGTTATCAGAGTTGATGAACTTTCTGAGGGCCTGCTTTCGGCCAGTTTCGCATCGTTATGCACGAACAGGTTCAGATGGTGGAGGTAGACAAGATGGGCTTTTATGGTACAAGGACTCGGGGCAGCATTTAAACGGCGAATTTTCAATGGCTGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAACTTGAATCTGGCAGTTTGAGCTCCCATGAATCTGGCCCTTATGGAACCTTTATCGGTGTCTACGACGGCCATGGAGGACCGGAAACATCCCGATTTATCAACGATCACCTGTTTCACCATCTCAAGAAGTTCACTGCAGAGCAACAATCAGTGTCTGTAGATGTAATCCGGAAGGCATTTCAAGCAACAGAAGAAGGATTTATGTCACTTGTTGCCAAACAGTGGCAAATGAAACCACAAATTGCAGCAGTTGGGTCGTGCTGTCTTGCTGGTGTTATTTGTAATGGTAACATTTATGTAGCAAATCTTGGTGATTCCCGTGCTGTTTTGGGAAGAGCAGTCAAGGCAACTGGAGAGGTTCTAGCCATGCAATTATCTACAGAGCACAATGCAGCTTTAGAGCCTGTTAGACAGGAGCTGCGCTCTTCGCATCCCGATGATCCACAGATTGTTGTTTTGAAGCATAATGTATGGCGAGTGAAGGGCCTTATACAAATTTCTAGATCCATTGGGGATGTATATTTGAAGAAGGCTGAGTTCAATAGAGAACCTCTATATGCTAAATTTCGACTTCGTGAGCCATTCAAGAGGCCAATACTGAGCTCAGAACCATCAATATCAGTGCACCAGTTGCAGCCACATGATCAGTTTGTTATATTTGCGTCTGACGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTCGATATAGTTCAAAACAATCCCCGCAGTGCAAGCGCGAGGAGACTGGTGAAAGCTGCCCTTCAAGAAGCAGCGAAGAAGAGAGAAATGAGATATTCGGACCTAAAGAAAATTGACCGTGGGGTTCGACGACATTTCCATGATGACATTACTGTGATTGTGGTATTTCTTGACTCAAATCTGGTCAGCAGGGCAAGCTCTGTCAAATTCAACAATATATCAGTTAGAGGGGGTGGAATTACCCTTCCTCCTAACACGCTGGCACCATGTGCGACGCCAACAGAGGGTGGTGGTACCTGA 1194 0.459 MLSELMNFLRACFRPVSHRYARTGSDGGGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQLESGSLSSHESGPYGTFIGVYDGHGGPETSRFINDHLFHHLKKFTAEQQSVSVDVIRKAFQATEEGFMSLVAKQWQMKPQIAAVGSCCLAGVICNGNIYVANLGDSRAVLGRAVKATGEVLAMQLSTEHNAALEPVRQELRSSHPDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNNPRSASARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVKFNNISVRGGGITLPPNTLAPCATPTEGGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3108g00003 397 CDD PP2Cc 48 355 IPR001932 -
Pral3108g00003 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pral3108g00003 397 SMART PP2C_4 39 353 IPR001932 -
Pral3108g00003 397 SUPERFAMILY PP2C-like 60 356 IPR036457 -
Pral3108g00003 397 Gene3D - 37 366 IPR036457 -
Pral3108g00003 397 PANTHER PROTEIN PHOSPHATASE 39 353 IPR015655 GO:0004722|GO:0006470
Pral3108g00003 397 Pfam Protein phosphatase 2C 76 323 IPR001932 -
Pral3108g00003 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Pral3108g00003 397 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3108g00003 Pral-Chr3108 21271 25589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3108g00003 1 396 PP2C-type Phosphatase Gene Family AT4G38520 74.495 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3108g00003 - - zju:107427407 685.256