Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3107g00004 ATGGGTGGGAATTCCCCCTGCGCTTCATGCAAATTGCTCAGACGCCGATGCGCCAGAGACTGCATTTTTGCTCCCTATTTCCCTTCCGATGATTCCCAAAAGTTCGCCATCGTCCACAAGGTTTTTGGCGCCAGCAACGTCAGCAAAATGTTACAGGAACTTCCGGTGCACCAGAGAGCCGATGCGGTGAGCAGTCTGGTGTATGAAGCTAATGCGAGAGTGAGAGACCCGGTTTATGGCTGTGTCGGGGCCATATCGTACCTGCAAAACCAGGTGTCGGAGCTTCAAATGCAGCTGGCGCTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAGAATGATCCGGTGATGCTGCCATACCCACCAGATCACCCCAAATCATACTTTCTCCAAAATGACCTTCCTCAGCATCTCAATTTAGCTTCTTCTGGCAATGTAATCCATCGCGATCACTCTCTCAAGATAGAGAGCATCTTTGGACATGACATGGTTTCTTGA 498 0.504 MGGNSPCASCKLLRRRCARDCIFAPYFPSDDSQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLALAQAEILCIQMQNDPVMLPYPPDHPKSYFLQNDLPQHLNLASSGNVIHRDHSLKIESIFGHDMVS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3107g00004 165 Coils Coil 85 105 - -
Pral3107g00004 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 124 - -
Pral3107g00004 165 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Pral3107g00004 165 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3107g00004 Pral-Chr3107 17218 17991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3107g00004 3 117 AS2 family AT2G30130 89.565 4.69e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3107g00004 LOB 2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3107g00004 - - lang:109360574 274.248