Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3099g00003 ATGGCTGGCCAAAATTCAAGTACCATTAATGAAGCTCCACAAAACCCAACGCCCAACTCACTCATTCAGTGCTATTCATTGAACCTCAATGACCAAACCCGTATCATAGATGGGATATCAATGCTTTCTGGTTCTGAAGTGCACGGCTCATCTGTAAGCAATGTGAATGTGCGCCTGATAAATCCAGAAAGTACTGGTTCTAATGCATTTTCTTCATCGCAAGGAAAGAACATTTTTGGATATGCCTCACATGGAACTTCATGTCCCATAAATAACAGTGAGTTTCAGGAGCAAACAGCCGGAGGAACACCAGTTACCCCTGCTTCACTTGCTAGCATTCTTGCTGCTAGAATTGGTCTTCAAGAAAATTTAGAGAAATCACAAGTTTTATCTCCTTCGTTCAGTTCATTGGGCTCATTGGGACCTTACATGTTAGACAATTGGTCATATACTCCAAGTCATTTGCATTTAACTTCCGGGGGCCATGACTGCAACAATCATATGCCTGAGGAAATCTTGGATTCAAATGGATGGGCTTCATCAAATGTTACAGACTTGAGCAGCCATGCTTATGGTTCATCTAATTTTAGTAATGAACCTGTATTAAGTCTTGCAACATCTCAAACCACAGGCCAGTGCTCAGAGGTGAGTTGTTCTGATGAAATCACCCGTTGCTTCAGTAAAGCAAGGTCAGGATTGGAACATGCCTCTTGCAGCAACAGGGAACTTGCCATGAGTCTGAACTCTGGTAGACACTTCCATTTTTCGCAGGCAATGCTAGGATCAAGATATCTTACTGGAGTTCAAGAGATACTTGCTCAACTTGCAAGCTTTTCACTTGAGAATCTTGAACAGATAAGATATTCACAAGCAAATTCTATGTTCAAATTCCACATGGAAGCTCCATTGGAAAGACATGCAGCTGAATCAAAGAAATCCCAGCTGCTGACACTCTTAGAACTGGTGGACAAGCGATATAATCAGTGTTTGGATGAGATTCATACTGTTGTGTCTGCATTCCATGCTGCTACAGAGTTGGACCCACGCGTTCATGCGCATTTTGCTCTTCAAACGATCTCTTTCTTGTACAAGAACTTGCGAGAGAGGATCAGCAATTACATTCTTGCCATGGGGCGGGATTTTGACAGTTTATGCACACTGGACAAGGAAAGATCTGTTGATACTTCACTCATCCATAAGCAACTGGCTCTCCAACAGTTGAAACGAAAAGATCATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAAAACTCTGTCTCGGTCTTAAGAGCCTGGATGTTTCAGAACTTTCTCCATCCGTATCCTAAAGATTCAGAGAAACATTTACTTGCTTTAAGAACTGGGTTGACGAGAAGCCAGGTATCTAACTGGTTTATAAATGCTCGTGTTCGGCTATGGAAACCCATGATTGAGGAAATGTACGCTGAACTGGATCATAAAAGAAAGGCTAGTCGAAATGAAGGAGGAACAGAGAACAGCCGTGGAAAATCAACTTTGAGATAG 1524 0.4245 MAGQNSSTINEAPQNPTPNSLIQCYSLNLNDQTRIIDGISMLSGSEVHGSSVSNVNVRLINPESTGSNAFSSSQGKNIFGYASHGTSCPINNSEFQEQTAGGTPVTPASLASILAARIGLQENLEKSQVLSPSFSSLGSLGPYMLDNWSYTPSHLHLTSGGHDCNNHMPEEILDSNGWASSNVTDLSSHAYGSSNFSNEPVLSLATSQTTGQCSEVSCSDEITRCFSKARSGLEHASCSNRELAMSLNSGRHFHFSQAMLGSRYLTGVQEILAQLASFSLENLEQIRYSQANSMFKFHMEAPLERHAAESKKSQLLTLLELVDKRYNQCLDEIHTVVSAFHAATELDPRVHAHFALQTISFLYKNLRERISNYILAMGRDFDSLCTLDKERSVDTSLIHKQLALQQLKRKDHQLWRPQRGLPENSVSVLRAWMFQNFLHPYPKDSEKHLLALRTGLTRSQVSNWFINARVRLWKPMIEEMYAELDHKRKASRNEGGTENSRGKSTLR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3099g00003 507 MobiDBLite consensus disorder prediction 488 507 - -
Pral3099g00003 507 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 187 491 - -
Pral3099g00003 507 Gene3D - 418 495 - -
Pral3099g00003 507 CDD homeodomain 415 476 IPR001356 GO:0003677
Pral3099g00003 507 Pfam Homeobox KN domain 432 471 IPR008422 GO:0003677|GO:0006355
Pral3099g00003 507 ProSiteProfiles 'Homeobox' domain profile. 412 475 IPR001356 GO:0003677
Pral3099g00003 507 SMART prehox3 253 372 IPR006563 -
Pral3099g00003 507 Pfam Associated with HOX 260 371 IPR006563 -
Pral3099g00003 507 SMART HOX_1 415 479 IPR001356 GO:0003677
Pral3099g00003 507 SUPERFAMILY Homeodomain-like 416 484 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3099g00003 Pral-Chr3099 12456 14445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3099g00003 198 489 Homeobox Transcription Factor Family AT4G32980 54.662 2.08e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral3099g00003 POX 8.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3099g00003 - - pcin:129318985 878.626