Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3098g00013 TGGGATCTACTTCGTGATGGGCTTCTCTCATCCAAAACCAACCGGGATTGCCTCTGTGAGTCTTCTAATGCTCCGTCTTCTTCCCATCTAGTTTCAGATCGCTACTGTAATCACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGGAGCTTGGCTTTGCCTGCGTTGCCCTGCCTCGCCACCTGCCAAGCTTCGGTAAAAACGACGGCGACGGTTATAGAAAGACGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCAGAGTCTGATGGGTGCGGAGCAGAGGTGACGAATGCTGACCCACAATCTGTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTTGAGCTCGAATCCTGGAGCTTGAATTCTTCCGCTGCTGCAACCGTCTTGATGGTCAATCTGGACGATAGAATGAATAATGCTCGAGCTCGAGAGCTGAAATGTCGGAGGATCGAGTTCTTGGAAAAAAGCATTTCCCCTGTAGCCAACACTTTGATCAGGTTCAACTACGGTGAAATTCTATCTGCTACTCGCAATTTCTCCGAAGGAAGAGTATTGGGGAGAGGAGCCTTGAGCTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTAGACAAGGAAGACAAGGAATCTGCGAAGGCATTCTGTAGAGAACTGATGATTGCCAATTCTCTTCATAGCCCAAACATTGTTCCCCTTGTGGGCTTTTGTATTGACCCCGAGGAGGGTTTATTTCTGGTGTACAAATATGTCTCCGGGGGCAGCCTAGAGCACCATTTGCATGAAAGGAAGTGTGTGAAGGGTAGTTCACCACTTCCCTGGCCTGTGAGGTATAAAGTTGCCATTGGAATTGCAGAAGCCCTGGCTTATCTGCATAACGGAACTGAAAGATGCGTTGTTCACAGAGATATTAAACCCTCAAACATTCTTCTTTCCTCCAAAAAGACTCCTAAGTTATGCGATTTTGGATTAGCTACATGGACTACTGCACCTTCAGTTCCTTTCCTCTGCAAAACAGTCAAGGGAACATTTGGTTATTTGGCTCCTGAATATTTCCAACATGGAAAAGTATCTGCTAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAGGCCAATAGAAGCAAAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGGCTAGACCCTTCCTGCAGAAGGGGAAGGGGGCCATTGAAGAGTTGCTGGATCCTCGACTCAAGCGCAGTTTGAGATTCTCAAATCAGATGGCTCAGGTGATAGAAGCAGCAGCTGCCTGTGTTACGAATGAAGAATCTCGGAGACCTGGAATACAAGAGATTATTGCAATACTGAGAGGCCAAGAAGAACGTGTCTTGCCTAAAAGGAAGAAGTCTGGTCTACTTGGGAATGGGTTGGTAGTTGATTGCTACCCTCAACTACACCAAACAAATAACGAGATGAAAAGACACTTGGCTCTAGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTATATGGCCGTTGA 1569 0.4595 WDLLRDGLLSSKTNRDCLCESSNAPSSSHLVSDRYCNHKLKFRTILRKMIWELGFACVALPRHLPSFGKNDGDGYRKTNLEHNKAWLLAESDGCGAEVTNADPQSVHSSFRFSFCSQVELESWSLNSSAAATVLMVNLDDRMNNARARELKCRRIEFLEKSISPVANTLIRFNYGEILSATRNFSEGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIANSLHSPNIVPLVGFCIDPEEGLFLVYKYVSGGSLEHHLHERKCVKGSSPLPWPVRYKVAIGIAEALAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTTAPSVPFLCKTVKGTFGYLAPEYFQHGKVSAKTDVYAFGVVLLELITGRRPIEAKKPPGEENLVLWARPFLQKGKGAIEELLDPRLKRSLRFSNQMAQVIEAAAACVTNEESRRPGIQEIIAILRGQEERVLPKRKKSGLLGNGLVVDCYPQLHQTNNEMKRHLALAMLGVSEFEDDDYLYGR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3098g00013 522 SUPERFAMILY Protein kinase-like (PK-like) 168 465 IPR011009 -
Pral3098g00013 522 FunFam probable serine/threonine-protein kinase PBL7 145 261 - -
Pral3098g00013 522 Gene3D Phosphorylase Kinase; domain 1 169 261 - -
Pral3098g00013 522 Gene3D Transferase(Phosphotransferase) domain 1 262 477 - -
Pral3098g00013 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Pral3098g00013 522 SMART serkin_6 184 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3098g00013 522 Pfam Protein kinase domain 185 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3098g00013 522 ProSiteProfiles Protein kinase domain profile. 184 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3098g00013 522 PANTHER OS01G0750732 PROTEIN 128 466 - -
Pral3098g00013 522 FunFam Putative receptor-like serine/threonine-protein kinase 262 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3098g00013 Pral-Chr3098 24481 27473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3098g00013 172 507 Trihelix Transcription Factor Family AT1G70460 39.474 6.02e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral3098g00013 Pkinase 2.5e-46 CL0016