Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3097g00006 ATGTCCGAAACTGAAAACAAACCTTTGCAGCCGCTTTGGTATACTTCTATACAGGGATATCATTATCCTATGCCTGCACCAACACCTATTATAAATTCACATGCAGCTGCAGCCGGTTCTTACTATTATCCCCACATTTGGCCAAACCAGACTTTCTGCAGTCCCCTTAAATATGACCCTCTGCATGATCCCAGCGGGCTCAAGGATCATCCAATTGTTTCCGGGGGCTCTGCTTCAACATTTTCAGATAAAGTACAAAGGACTTTCAGTGGAGAGAACGTGGATTTGACAAAAGCATGTGAAGGGAACTTACAACCTAGAAGTTCTGTCCTTAAGGAATTAAGAGAAAATGGAAATGAATCATCAATTTCCAAAAATGAGCAAGATAGAGGGACATGGAGTGCTACAAATGGAAGCATGGGATCGTCAGATGAAGGCCATGACACTGACAATGGTTTCCCTTCAAGTAGAGAGCAGCAATGTAACATGATGCTTGCAAATAGGGACCTTACACAGAATGGGGCTAGAATAGAAAATGGTAATGCAATTCACGTGAACAAAGAATCTGCGTCACAGCAATTTGCGGTGAATTCAAGTGAACCAAATCTGAATTCAGAAACCAACCTCAATACATCTGGGACAATTCATGGACTTGCAAAACTGGAAGAAGATGAAATAAGAAAAGAAAGAAAAAGGCAATTAAATAGGGAATCAGCCAGGAGATCAAGGATGCGTAGGCAGCAAGAATGTGATGAGCTACGTAAAATCATGGATGATCTTGTGAAGAAGAATTCCTTGCTGAAGGACAAGCTTGTGAGCCTTTCTGAAGACTGTCTAGAGCTCAATAATGAAAACGACTACATAGAGGAAGAGATCACCAAGATGTATGGGATAGAATCAATTGCCGATCTTATAGCCATGAGGCCTGGCGGAGTAACTCGTTGA 945 0.418 MSETENKPLQPLWYTSIQGYHYPMPAPTPIINSHAAAAGSYYYPHIWPNQTFCSPLKYDPLHDPSGLKDHPIVSGGSASTFSDKVQRTFSGENVDLTKACEGNLQPRSSVLKELRENGNESSISKNEQDRGTWSATNGSMGSSDEGHDTDNGFPSSREQQCNMMLANRDLTQNGARIENGNAIHVNKESASQQFAVNSSEPNLNSETNLNTSGTIHGLAKLEEDEIRKERKRQLNRESARRSRMRRQQECDELRKIMDDLVKKNSLLKDKLVSLSEDCLELNNENDYIEEEITKMYGIESIADLIAMRPGGVTR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3097g00006 314 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Pral3097g00006 314 Pfam bZIP transcription factor 223 285 IPR004827 GO:0003700|GO:0006355
Pral3097g00006 314 Coils Coil 250 291 - -
Pral3097g00006 314 MobiDBLite consensus disorder prediction 114 157 - -
Pral3097g00006 314 CDD bZIP_plant_GBF1 228 278 IPR045314 GO:0003700|GO:0006355
Pral3097g00006 314 MobiDBLite consensus disorder prediction 124 157 - -
Pral3097g00006 314 Gene3D - 218 285 - -
Pral3097g00006 314 SUPERFAMILY Leucine zipper domain 226 281 IPR046347 GO:0003700|GO:0006355
Pral3097g00006 314 PANTHER G-BOX-BINDING FACTOR 3-RELATED 11 296 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral3097g00006 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 288 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3097g00006 Pral-Chr3097 30489 33956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3097g00006 11 304 bZIP Transcription Factor Family AT4G36730 25.743 3.31e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3097g00006 bZIP_1 2.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3097g00006 K09060 - gmx:102665715 228.794