Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3094g00002 ATGGAGCGGATCATCGGCGGCAAGTACAAGCTCGGCCGCAAGATCGGGAGCGGATCCTTCGGTGAAATTTACCTCGCTACTCATGTCGATACTTTTGAGATAGTCGCGGTTAAAATTGAGAACACTAAAACTAAGCATCCACAACTGCTCTATGAGGCAAAACTGTATCATGTTCTTCAAGGAGGAAATGGAATTCCTAGCATAAGGTGGTCTGGTATAGACCGGGAGGACAATGTGCTAGTTCTTGATTTGCTGGGACCCAGTCTTGAAGATCTCTTTGTGTATTGTGGAAGAAAGTTTTCGTTGAAGACTGTATTAATGTTGGCTGATCAGATGATCGCTAGAATAGAATATGTTCATTCTAAGGGTTTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGGCGGAAGGCCAATCAGGTTTACGTAATTGACTTTGGGCTTGCAAAACGATATCGGGATCCCACAACCAAAAGTCATATTCCTTACCGGGAGAACAAAAACTTAACAGGTACTGCACGTTATGCAAGTTGTAATACTCACCTTGGCATTGAGCAAGGCCGCCGGGATGACTTGGAGTCACTAGGATATGTGCTTCTGTACTTCCTTAGAGGAAGTCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGCGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAAGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCATTATTGCCACTCTTTGACATTTGACCAGCGACCTGATTATGGGTTTTTGAAGCGTCTTTTCCGGGACCTATTTGCTCGACAAGGTTTTGAATTTGATTATGTGTTTGATTGGACCATTTTAAAGTACCAACAGACACAGAAGGTTAAAGTTCAGCCTCACACATCTCCAGCTCCTGGAGCACGCAGAAGTCAGGCAATGCCAACGGTTGTTGACAATTCCCATGGTGTTTATGCTTATTCAGGGGATGTATCGGAGCACATTAGATCTGGCAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAATCAACAGCAGGAAAAAATGTGGGTGTTGGTAATCCTGTTGAAAAGAATATTTTTGAAGAAGCAAAAATGCCTTCTACTTCATATTCACATGCTGGTACCTCAAAAAGGAAATTCCTGAAGCCCGCCTTGACCACTGAAGCTGCAAACCCTGTTCGTGGCCAAGGCAGTAAGATTGGTCCTTCAAGTAGCTGGATTTCATCTCTGCAACGCATATCTTCTGCCAAATGA 1293 0.4269 MERIIGGKYKLGRKIGSGSFGEIYLATHVDTFEIVAVKIENTKTKHPQLLYEAKLYHVLQGGNGIPSIRWSGIDREDNVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMIARIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYVIDFGLAKRYRDPTTKSHIPYRENKNLTGTARYASCNTHLGIEQGRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLSKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFARQGFEFDYVFDWTILKYQQTQKVKVQPHTSPAPGARRSQAMPTVVDNSHGVYAYSGDVSEHIRSGNATGSGVKMQFKSTAGKNVGVGNPVEKNIFEEAKMPSTSYSHAGTSKRKFLKPALTTEAANPVRGQGSKIGPSSSWISSLQRISSAK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3094g00002 430 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3094g00002 430 Gene3D Transferase(Phosphotransferase) domain 1 1 327 - -
Pral3094g00002 430 FunFam Casein kinase I isoform delta-like 1 339 - -
Pral3094g00002 430 MobiDBLite consensus disorder prediction 396 430 - -
Pral3094g00002 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3094g00002 430 PANTHER CASEIN KINASE-RELATED 8 346 - -
Pral3094g00002 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral3094g00002 430 MobiDBLite consensus disorder prediction 404 430 - -
Pral3094g00002 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral3094g00002 430 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3094g00002 430 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3094g00002 Pral-Chr3094 31113 35785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3094g00002 9 215 EF-hand Containing Proteins AT4G23650 30.516 1.04e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral3094g00002 Pkinase 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3094g00002 K08960 - gmx:100800342 720.309