Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3093g00002 ATGGGAAATTGCTTCGGGTCTCGTCTCAAGGTTGATTACACTCGCAGCTCTCATCAAACTAGTGGTACATCTGTTTCAACAATCTCTTCTGGTCAATCAGTGGTTGAATACAACAACGAAGATAAATCTCAGATTCTCAGTGCCCAAAGATCTGAAGGTGATATACTTTCCTCACTAAATTTGAAGGCCTTCACATTTAATGAACTTAGGAATGCTACTAGAAACTTTGGTCCCGATAGTCTAATAGGACAAGGGGGCTTTGGTGATGTCCACAAGGGGTGGATTGATGAGCAATCCCTTAGTGCTACTAAGCCTGGATCTGGGATGGTTGTGGCCGTGAAGAAGTTGAAACCTGAAGGTTTTCAAGGGCATAAGGAGTGGTTGTCTGAAGTCAATTATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTATTGGATACTGCCTAGATGGAGACAAACGACTTCTGGTATATGAGTACATGCCCAAAGGCAGCTTGGAGAACCATCTATTTTACAGGGGCTCCCAGTCACTTTCATGGCCAACAAGGATCAAAGTTGCAATTGGTGCTGCTCGTGGTCTCGCCTTTCTACATGACTCCAATCCACAAGTTATCTACCGTGATTTTAAGGCTTCAAATGTATTATTAGATTCGGAATTCAATGCTAAACTATCGGACTTTGGGCTGGCTAAAGCGGGACCAACTGGTGATCGTTCTCATGTTTCAACTCAAGTTATGGGTACTCACGGCTATGCTGCTCCTGAATATATTGCTACTGGTCGGCTAACAGCAAGGTGTGATGTTTATAGCTTCGGGGTTGTGCTTTTGGAGCTGCTATCAGGGCGTTGTGTCATTGACAAAACAAAATCTAGAGCGGAACAAAATCTGGTAGAATGGGCAAAATCGTCCTTTTTGGGAGATAAGAGAAAGCTATTCAGGATTATGGACACCAAGTTAGAAGGCCAGTACCCACAGAGAGCTGCTTATGCAGCTGCAATCCTTGCATTACAATGTGTCAGTGAGGCCAAAATCAGACCCCAGATGTCTGAGGTTGTGGCGACATTAGAACAGCTTCCGGCTGGACAGAGCCGGAGGTCGGCCCCTTCTTCTGCAGGGTGCCCTTTGGGAGATGTTCATAGCTTAACAGAGAGCAAGTCATCTAGTCACCCAAGTGGCGGCACTGTGATATCTCCATTGCCATCTATGAGATCCCAAAGGGGGTGA 1227 0.4531 MGNCFGSRLKVDYTRSSHQTSGTSVSTISSGQSVVEYNNEDKSQILSAQRSEGDILSSLNLKAFTFNELRNATRNFGPDSLIGQGGFGDVHKGWIDEQSLSATKPGSGMVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLDGDKRLLVYEYMPKGSLENHLFYRGSQSLSWPTRIKVAIGAARGLAFLHDSNPQVIYRDFKASNVLLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVMGTHGYAAPEYIATGRLTARCDVYSFGVVLLELLSGRCVIDKTKSRAEQNLVEWAKSSFLGDKRKLFRIMDTKLEGQYPQRAAYAAAILALQCVSEAKIRPQMSEVVATLEQLPAGQSRRSAPSSAGCPLGDVHSLTESKSSSHPSGGTVISPLPSMRSQRG 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3093g00002 408 SUPERFAMILY Protein kinase-like (PK-like) 51 356 IPR011009 -
Pral3093g00002 408 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Pral3093g00002 408 Pfam Protein tyrosine and serine/threonine kinase 81 290 IPR001245 GO:0004672|GO:0006468
Pral3093g00002 408 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3093g00002 408 FunFam Serine/threonine-protein kinase BIK1 43 161 - -
Pral3093g00002 408 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Pral3093g00002 408 MobiDBLite consensus disorder prediction 361 408 - -
Pral3093g00002 408 PANTHER OS01G0588500 PROTEIN-RELATED 39 359 - -
Pral3093g00002 408 FunFam Serine/threonine-protein kinase PBS1 162 372 - -
Pral3093g00002 408 Gene3D Transferase(Phosphotransferase) domain 1 162 371 - -
Pral3093g00002 408 MobiDBLite consensus disorder prediction 381 408 - -
Pral3093g00002 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pral3093g00002 408 CDD STKc_IRAK 82 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3093g00002 Pral-Chr3093 4415 7634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3093g00002 38 356 Glycoside Hydrolase AT3G07070 52.322 7.18e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral3093g00002 PK_Tyr_Ser-Thr 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3093g00002 - - qsa:O6P43_022821 575.859