Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3089g00001 ATGGCTAAGTACTCCGATGCTCACATTTGCCAATGTTTGAGTCGATTGTTAACTTCCCGACGAAATCTTCCGGTCACAATTGCCAATGACCGTCACAAAACTGGAGAACAGTTCGTGCATGAAGTAGTAGCGTTGGCCTACGGTCTTCAAGAATTGGGAATTAAAGCAGGCGACGTTGTCGCCATCTCTGCTTACAACAGTGATTTGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGGATAGCTTCTCTTCTGAACTATCGATGGAGCATTAAAGAGACAACATTGGCAATTAACTCCGTGAGACCAGTGATGTTGGTTACTGATGAGAGCTGTTACACCTGGTTCATAAACCTCCAAAAAGAGGATACCTCATCTCTTAGGTGGCATGTCTTTATAGGCTCCCCTTCCTCAGATTTTGTCAAGAAGTGGAATGTCCTAATTCCAGAATTACTAAAGAAGCATCTCACAAAGCTTCCACCGTCTTGTTACTCCTGGGCTCCTGAAGGCGCTGTCGTAATATGCTTCACCTCAGGAACCACGGGAAAACCCAAGGGAGTCACCCTAAGCCATGCAGCTCTGTTCATACAATCTCTAGCTAAGATCGCCATTGTTGGGTACAGTGAGGATGATATCTATTTGCATAGTGCTCCATTGTGCCATATTGGTGGATTGTCATCGGCAATGGCTATGTTAATGGTTGGCGGTTGCCATGTCTTGATGCCGAAGTTTGACGCTCAATCGGCTGTTGATGCCATAGAGCAATATACTGTCACATCTCTAATCACAGTCCCCGCAATAATGGCTGATATGGTGTCGTTAATTAGGGGCAAGGAGATCTGGAAATGTGGGGAATCCATCAAGAAAATACTTAACGGAGGTGGGAGCCTCTCAAATGAACTAATCATGTACTCCAGTATATTCTTCCCTAAGGCTAAGCTTATATCAGCTTATGGGATGACTGAGGCTTGCTCTTCACTGACATTCCTGACCCTCTATGACGCAACTCAAGAAAAGATTGGTCAGTCCTCTCAGATGGCTGTGAATAGAAGATCTGAGACAATAAAGTACTCCCAAGGGGTTTGTGTTGGCAAGGCTGCTCCCCATGTAGAACTCAGTATATGTGCAGATTCCTCTGGCCATGTTGGGAGAATTTTAACCAGAGGACCACATGTAATGATCCGATATTGGGATCAAACTTCGACAAGCTCATTAGATCCCTCAAATGAAGTCTGGCTTGACACAGGTGACATTGGATCAATTGATCAAAACGGTAATTTGTGGCTCCTGGGGCGAACAAAAGGTCGGATCAAGAGTGGTGGAGAGAACATCTATCCTGAAGAGGTTGAAGCAATTCTTCTGGAACATTCTGGGATTGCTGCTGTAGTAATTGTTGGAATACCTAATGCTCGCTTGTCTGAAATGGTAGTTGCTTGTATCCAACCAAGAAAAGACTGGCAATGGTCAGAGCAGTCTGTTTCAGATGATCATCACTTGTCACCAGAGAATCTTCGGCAATATTGTATAGAAAAGAATTTAAGCAGGTTTAAGATTCCAAAAATGTTTATCCTGTGGAGGAAGCCCTTTCCACTCACTACGACGGGAAAAATAAGGAGAGACCAACTCCGAAAAGAACTCATGTATCAACTACATTCTTTGCATAGCAATATTTGA 1680 0.4387 MAKYSDAHICQCLSRLLTSRRNLPVTIANDRHKTGEQFVHEVVALAYGLQELGIKAGDVVAISAYNSDLYLEWLLAIAFVGGIASLLNYRWSIKETTLAINSVRPVMLVTDESCYTWFINLQKEDTSSLRWHVFIGSPSSDFVKKWNVLIPELLKKHLTKLPPSCYSWAPEGAVVICFTSGTTGKPKGVTLSHAALFIQSLAKIAIVGYSEDDIYLHSAPLCHIGGLSSAMAMLMVGGCHVLMPKFDAQSAVDAIEQYTVTSLITVPAIMADMVSLIRGKEIWKCGESIKKILNGGGSLSNELIMYSSIFFPKAKLISAYGMTEACSSLTFLTLYDATQEKIGQSSQMAVNRRSETIKYSQGVCVGKAAPHVELSICADSSGHVGRILTRGPHVMIRYWDQTSTSSLDPSNEVWLDTGDIGSIDQNGNLWLLGRTKGRIKSGGENIYPEEVEAILLEHSGIAAVVIVGIPNARLSEMVVACIQPRKDWQWSEQSVSDDHHLSPENLRQYCIEKNLSRFKIPKMFILWRKPFPLTTTGKIRRDQLRKELMYQLHSLHSNI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3089g00001 559 CDD AFD_class_I 175 540 - -
Pral3089g00001 559 Gene3D - 2 437 IPR042099 -
Pral3089g00001 559 PANTHER ACYL-COA SYNTHETASE 5 549 - -
Pral3089g00001 559 Gene3D - 438 551 IPR045851 -
Pral3089g00001 559 Pfam AMP-binding enzyme C-terminal domain 450 538 IPR025110 -
Pral3089g00001 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 550 - -
Pral3089g00001 559 Pfam AMP-binding enzyme 23 441 IPR000873 -
Pral3089g00001 559 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3089g00001 Pral-Chr3089 23977 33709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3089g00001 42 554 Monolignol Biosynthesis Gene Families AT4G19010 27.307 1.59e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3089g00001 K14760 - gmx:100809925 810.831