Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3080g00004 ATGGCTTCCCTTCTTCATTATCCTCCACGCCCATCGGGGCTAGAGATTGAAACGCCGACGTTAGATGTGGAAGAAGACTTACGTGGTCCAACAAACAAGAAGAAGGAGGGTGATCATGATATTGATGGAGGAGAAGAGAAGGGGATATGGCTGACGTGGAAGGATGTGTGGGTGAGAGCTTCTTCAAGTGGGAAGAAGAAGAAAGGGATTAATGGAAGCAGAACAATACTGGAAGGTCTCACTGGTTATGCCAAGCCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACCTTAGCAGGGAGATTAGGTTCAAACACAAGGCAAGCAGGGGAAATTCTGATTAATGGCCACAAACAAGCACTTGCATATGGGACCTCGGCATATGTGACCCAAGATGATACTTTGCTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCTCAGCTTCAATTACCAGACACAATGTCCAAGCAAGAGAAAAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGTCTTCAAGACGCCATTGACACCAGAATTGGAGGTTGGGGTTGTAAGGGAATCAGTGGAGGCCAAAAGAGGAGAGTGAGTATTTGTATAGAGATCCTGACACGTCCAAGGCTTCTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTCATGAGCAGAATCGCCAGCCTTGATCGCAAGGATGGGATTCAAAGGACCATTATTGCATCCATTCATCAACCTAGTACTGAAGTGTTTCAGCTTTTTGATAATCTGTGTCTTCTTTCTTCTGGGAGAACTGTGTTCTTTGGTCCTGTTTCTGCAGCAAATGAGTTCTTTGCTTCAAATGGGTTTCCTTGTCCTGCTCTCCAGAATCCATCCGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATGATCAGGACGTTGAACTGGGCTTCATTGGAACTCAAAGGAAACCTACAGAAGAAGCAATAAATATGCTTGTGAAATCATACAAGTCTTCTGACTTGAACCAACATGTTCAAGCAGAAGTAGCAGCACTATCTACACAGGAAACTGGAATGGTGGAGAAGAAGAAGGAGAAAAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACCAAGAGATCATTCGTGAACATGCGTCGTGATGTAGGCTATTACTGGCTACGCCTTGTCATATACGTCGCCGTGGCCCTAGGTCTGGCCACTGTGTTCTATGATTTGGGCATGAACAAAGGGTCTATTCGAGATAGAGTTTCACTTCTTGCGTTTGTGTCTTCCTTCATAACTTTCATGACCATTGGTGGATTTCCTTCATTTGTGGAAGATATGAAGGTATTTCAAAGAGAGAGGCTAAATGGGCACTATGGAGTGACGGCCTATGTGATAGGAAACACCTTTTCTTCAATCCCATACCTATTACTCGTTACTCTCATTCCTGGGGCCATAGCCTATTACCTCCCAGGCCTTCAAAGTTCTGCTGAACACTTCATCTTCTTCTGCTGTGTCCTATTTTCATGTCTGATGTTAGTTGAGAGCCTGATGATGATAGTGGCTAGCATCGTCCCTAACTTCCTCATGGGAATCATAACCGGTGCTGGTCTTCAAGGCATCATGATGCTTGCAGGAGGCTTCTTCAGATTGCCCAATGATCTTCCCGGAATCTTGTGGAAGTATCCTCTCTTCTACGTCGCCTTCCATAGATACGCCTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTCAGGTTCGGTAATCATTCTGGGGAAGAGATTCTGAGAAAAGATTGGCAAGTTAACATGAGCTATTCTAAGTGGGTTGATCTTGCAGTTCTTCTGGGGATGATCGTTGTGTATAGAGTTGTGTTCCTGGTAATAATAAAAGGCACTGAGAAGATGAAGCCTATAGTTGCTTCTTTGCTTTCTGGAACTCCTAAGAAAAGCATGCAGGTCATGGTTAATCCTAGCGCTACACCTTTACATGAAGGCTTTGCATAA 2055 0.4448 MASLLHYPPRPSGLEIETPTLDVEEDLRGPTNKKKEGDHDIDGGEEKGIWLTWKDVWVRASSSGKKKKGINGSRTILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKQEKKERAEFTIREMGLQDAIDTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPVSAANEFFASNGFPCPALQNPSDHFLKTINKDFDDDQDVELGFIGTQRKPTEEAINMLVKSYKSSDLNQHVQAEVAALSTQETGMVEKKKEKRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLATVFYDLGMNKGSIRDRVSLLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTFSSIPYLLLVTLIPGAIAYYLPGLQSSAEHFIFFCCVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMMLAGGFFRLPNDLPGILWKYPLFYVAFHRYAYQGLFKNEFEGLRFGNHSGEEILRKDWQVNMSYSKWVDLAVLLGMIVVYRVVFLVIIKGTEKMKPIVASLLSGTPKKSMQVMVNPSATPLHEGFA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3080g00004 684 Gene3D - 50 298 IPR027417 -
Pral3080g00004 684 Pfam ABC-2 type transporter 386 598 IPR013525 GO:0016020|GO:0140359
Pral3080g00004 684 Pfam ABC transporter 79 228 IPR003439 GO:0005524
Pral3080g00004 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 44 662 - -
Pral3080g00004 684 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Pral3080g00004 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 303 IPR003439 GO:0005524
Pral3080g00004 684 MobiDBLite consensus disorder prediction 21 41 - -
Pral3080g00004 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 292 IPR027417 -
Pral3080g00004 684 FunFam ABC transporter G family member 11 49 347 - -
Pral3080g00004 684 MobiDBLite consensus disorder prediction 1 41 - -
Pral3080g00004 684 SMART AAA_5 86 280 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3080g00004 Pral-Chr3080 24497 31811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3080g00004 76 264 Calmodulin-binding Proteins AT2G36910 31.500 5.47e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3080g00004 K05681 - gmx:100813462 959.518