Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3080g00003 ATGGCTTCCCTTCATTATCCTCCATTTCCATCTGGGCTAGAGATTGAAACGACGACGTTAGATGTAAAAGAAGCATCAAGTTGTCCAACAAAGACGAAGAAGAAGAAGGATGATATTGATGGAGGAGAGGAGAAGGGGATATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTTCAAGTGGGAAGAAGAAGAAAGGGGTTAATGGAAGCAGAAAAATACTGGAAGGTCTCACTGGTTATGCAAAACCAGGACAGCTTTTGGCCATTATGGGTCCTTCGGGTTGTGGCAAGTCTACTCTTCTTGATACTTTAGCAGGGAGATTGGGTTCAAACACAAGGCAAGCAGGGGAAATTCTTATTAATGGCCACAAACAAGCACTTGCTTATGGCACCTCGGCGTATGTGACCCAAGATGATACTTTGCTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCTGAGCTTCAATTACCAGACACAATGTCCAAGGAAGAGAAAAAGGAGAGGGCAGAGTTCACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACCAGAATCGGCGGATGGGGTTGTAAGGGAATAAGTGGAGGCCAAAAGAGGAGAGTGAGTATTTGCATAGAGATCCTGACACGTCCAAGACTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTACGTCATGAGCAGAATCGCCAGCCTTGATCGAAAGGATGGGATCCAGAGGACCATTATTGCATCCATTCATCAACCTAGTACTGAAGTGTTTCAGCTTTTTGATAATCTGTGTCTTCTTTCTTATGGAAGAACTGTGTTCTTTGGTCCTGTTTCTGCAGCAAGTGAGTTCTTTGCTTCAAATGGGTTTCCTTGTCCTGCTCTCCAGAATCCATCCGATCATTTCTTGAAAACTATAAATAATGATTTTGATGATCAGCAGGACATTGAACTGGGCTTCGTTGGAACTCAAAGAAAAACTACAGAAGAAGCAATAGAAATGCTTGTGAAATCATACAAGTCTTCTAATTTGAACCAACAAGTTGAAGCAGAAGTAGCAGCGCTATCTCCACAGGAAACTGGAATGGTGGAGAAGAAGAAGGAGAAAAGAGGGCATGCAAGCTTCCATACTCAGTGCATTGTTCTTACAAAGAGATCATTTGTGAACATGCGTCGTGATGTAGGCTATTACTGGCTACGCCTTGTCATATACGTCGCCGTGGCGCTAGGTCTGGCCACTGTGTTCTATGATTTGGGCACGAGCAAAAGGTCGTCTATTCAAGATAGAGTTTCACTTCTTGCGTTTGTGTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCTTCATTTGTAGAAGATATGAAGGTATTTCAAAGAGAAAGGCTAAATGGGCACTATGGAGTGACAGCCTATGTGATAGGAAACACATTATCTTCAATCCCATACCTAGTGCTCGTGACTCTCATTCCTGGGGCCATAGCCTATTACCTCCCAGGCCTTCAAAATTCTGCTGAACACTTCATGTTCTTCTGCAGTGTCCTATTTTCATGTCTGATGTTAGTTGAAAGCCTGATGATGATAGTGGCTAGCATCGTCCCTAACTTCCTCATGGGAATCATAACCGGTGCTGGTCTTCAAGGCATCATGATCCTCGCAGGAGGCTTCTTCAGATTGCCCAATGATCTTCCCAGAATCTTCTGGAAGTATCCTCTCTTCTATGTCGCCTTCCATAGATACGCTTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTCAGATTTGATAATCATTCTGGGGAAGAGATTCTGAGAAACGAATTGCAAGTCAACATGAGCTATTCCAAGTGGGTTGACCTTGCCGTTCTTCTGGGGATGATCGTTGTGTATAGAGTTGTGTTCTTGATAATCATAAAGGGCACTGAGAAGATGAAGCCTGTAGTTGCTTCTTTGCTTTCTGGAACTCCTAAGAGAAGCATTCAGGTCATGGCTAATCCAAATGCTACACCTTTACAGAAGGCTTTGCATAAATTAAATCCAATGAGTTATTAG 2073 0.4351 MASLHYPPFPSGLEIETTTLDVKEASSCPTKTKKKKDDIDGGEEKGIWLTWKDVWVTASSSGKKKKGVNGSRKILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAELQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSYGRTVFFGPVSAASEFFASNGFPCPALQNPSDHFLKTINNDFDDQQDIELGFVGTQRKTTEEAIEMLVKSYKSSNLNQQVEAEVAALSPQETGMVEKKKEKRGHASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLATVFYDLGTSKRSSIQDRVSLLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLVLVTLIPGAIAYYLPGLQNSAEHFMFFCSVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPNDLPRIFWKYPLFYVAFHRYAYQGLFKNEFEGLRFDNHSGEEILRNELQVNMSYSKWVDLAVLLGMIVVYRVVFLIIIKGTEKMKPVVASLLSGTPKRSIQVMANPNATPLQKALHKLNPMSY 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3080g00003 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 660 - -
Pral3080g00003 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 301 IPR003439 GO:0005524
Pral3080g00003 690 Pfam ABC-2 type transporter 384 597 IPR013525 GO:0016020|GO:0140359
Pral3080g00003 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 290 IPR027417 -
Pral3080g00003 690 Gene3D - 49 297 IPR027417 -
Pral3080g00003 690 SMART AAA_5 84 278 IPR003593 GO:0016887
Pral3080g00003 690 FunFam ABC transporter G family member 11 47 345 - -
Pral3080g00003 690 Pfam ABC transporter 77 226 IPR003439 GO:0005524
Pral3080g00003 690 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3080g00003 Pral-Chr3080 9057 14980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3080g00003 73 262 Calmodulin-binding Proteins AT2G36910 30.964 2.34e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3080g00003 K05681 - gmx:100813462 954.51