Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3078g00003 ATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGATAAAGCAAGAAGATCCATATTGAATTGGCAAAAGCGTTTCTACATCATATGTGGAGTTGCAAGAGGACTTCTTTACCTACATCAAGATTCTAGATTTAGGATCATTCATAGGGATCTTAAGGCCAGCAATGTCCTACTCGACGAAAAAATGAACCCAAAGATATCAGATTTTGGGATGGCAAGAATATTTGGAACAAATCAAACAGAAGCAAATACATTGAGAGTTGTTGGGACATACGGCTACATGTCTCCAGAATATGCCATGAATGGACTCTTCTCAATAAAGTCCGATGTATTTAGTTTTGGGGTTCTAGTACTCGAGATCATAATTGGCAGGAAGAACAGAGGGTTTTACTACTCAAATGATGAATTGAATCTTCTTGGACATGCATGGAGTCAATGGAAAGAAGGAAAAGCACTTGAACTCATCGATCCATCGATTGCAGGTTCATATTCGCCATCCGAAGTGCTTCGATGCGTGCAGGTTGGGCTCCTCTGTGTTCAAGAGCGCGCGGAAGATAGACCAACAATGTCCACTGTGGTATTGATGTTGAGTAGTGAAACTGTACTGATGCCACAGCCTAAAAGCCCTGGGTTTTGTGTGGGAAGGAACCCTAATGAAACAGAAACGTCTTCAAGTAAGCAAGACCAATCATACAGTGTGAATGAAGTTACTGTCACGATGCTACATGCTAGGTAG 735 0.4122 MENRSLDSILFDKARRSILNWQKRFYIICGVARGLLYLHQDSRFRIIHRDLKASNVLLDEKMNPKISDFGMARIFGTNQTEANTLRVVGTYGYMSPEYAMNGLFSIKSDVFSFGVLVLEIIIGRKNRGFYYSNDELNLLGHAWSQWKEGKALELIDPSIAGSYSPSEVLRCVQVGLLCVQERAEDRPTMSTVVLMLSSETVLMPQPKSPGFCVGRNPNETETSSSKQDQSYSVNEVTVTMLHAR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3078g00003 244 MobiDBLite consensus disorder prediction 215 232 - -
Pral3078g00003 244 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00003 244 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00003 244 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 243 - -
Pral3078g00003 244 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 204 - -
Pral3078g00003 244 Pfam Protein tyrosine and serine/threonine kinase 2 194 IPR001245 GO:0004672|GO:0006468
Pral3078g00003 244 SUPERFAMILY Protein kinase-like (PK-like) 1 220 IPR011009 -
Pral3078g00003 244 Gene3D Transferase(Phosphotransferase) domain 1 1 204 - -
Pral3078g00003 244 Pfam Domain of unknown function (DUF3403) 198 244 IPR021820 GO:0004674
Pral3078g00003 244 MobiDBLite consensus disorder prediction 208 232 - -
Pral3078g00003 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3078g00003 Pral-Chr3078 28366 29532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3078g00003 1 240 Receptor kinase-like Gene Family AT4G23150 59.583 1.96e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3078g00003 PK_Tyr_Ser-Thr 3.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3078g00003 - - aprc:113860154 414.846