Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3078g00002 ATGCATAATCTCCTAATCTTTGTTTTTAGTTTTACTCATATATTTTTCCTTCACAAAACTTCATCTGCAGCAAATACCTTATCGCCAAACCAATCTCTTATAGATGGCCAAGAGCTTACGTCTGCTGGACAACTTTTTGTTCTTGGATTTTTCACACCTGGAACCTCCAAAAGTCGATATGTAGGGATATGGTATAAAAATATTACACCCCAAACTGTTGTTTGGGTTGCTAACGGAGAGAACCCATTGAATGACTCAAGTGGGGAATTTACAATTGGTGCTGATGGGAATCTTGTTCTCTTGGATGGAGAAGAGAAAACTGTCTGGTCTTCAGGTCCCTCAAGAAAAATTCAAGATCCAATTGCAAAGCTGCTAGATTCTGGGAATCTTGTTTTGATTGATGGTAAAGGCGATTCTGGTAGTTATATATGGCAAAGCTTTGATCACCCTACTGATACTATGTTACCAGGCATGAGGGTTGGTTGGGATAAGAATTCAGGCCTAAACAGGTACTTGACTTCTTGGAAGGGTGAAAATGACCCATCTGAAGGAAACTTTACCTACATCTTTGATCATATTGAATTTCCTGAAATTGTGATTCGCGAGGGATCCATTATCAAGTTCCGGAGTGGAATTTGGAACGGTGTTGGAATAAATGGGGACATTTTGACATCATTTACAGCCTTCAAGCCAGAACTATTAGTAACTGACAACGAAGCAGTATATTGGAATGAACCAGGAGATAGACTTTCGAGGCTTGTGATGAGATATGATGGACAAGCTGAAAGATACATATGGGACACTCAAAATTCAAAGTGGACTAGTATCTATGAGGCGAGAAAAGACTTTTGTGATAATTATGGAGCTTGTGGGGAAAATGGTATCTGTGATATCAATAGTATCCCTGTTTTCTGTAATTGCTTGATTGGCTTCAAACCTAAATCTCAAGAAGAATGGAATGCATTTAGTTGGTCTGGAGGATGCACTAGGAGAACACCATTAAACTGCACACAGGGTGACAAGTTTAAAAAGTTTAGCTCGGTGAAATTGCCCATGTTGCTGCAATATTGGACACAAGATAATATGAGTATTGAAGAGTGTAAGATGAAGTGCTTGGAGAACTGTTCTTGTACAGCTTATGCAAATTCTGCTCTCAATGGAGGGCCTCATGGCTGTTTGATTTGGTTTGGCAACTTGGTTGACATGAAGTTGCTTCAAACTAAAGTAGGTCCACAACAGGATCTCTATGTCAGGTTAGCCGCATCAGAAGTAGGTTCCACTTCTACTGCTAGTAAAAGGAAAGTTGCAGTGGTGGCTATATCAGTGTCTTTGGCACTGCTTGTGTTGTGCTTCATAATTTTCCTTGCTAAGAAGTTTAAAGAGAAGAAAATGCGGAAGATTGTGACCGCCAATTTGGGGCAGAGACACCATAGTGAAGAGCAAGCATTGCCTCTTTTTGATATGCTTACTATTCTGGCTGCAACCAACAATTTCTCCAAGGAGAACCAGATTGGAGAAGGTGGTTTTGGCCCTGTTTACAAGGGTAAGATGTCAGATGGACAAGAAATAGCTGTAAAAAGGCTATCAAGAACATCGAAACAGGGGATCAAAGAGTTTATGAATGAAGTTGGATTTGTTGCCAAATTCCAACACCGAAATCTTGTCAGGGTTTTGGGTGGATGTGTTCAAGGAGAAGAAAGAATGTTAGTCTATGAATACATGCCTAATAGAAGTTTGGACCATTTTATTTTTGATCCTAGAGGAGGAAATCTTTTGAATTGGAGGAAGAGGTATGAAATCATTATGAGGATTGCTCGAGGACTGTTATATCTTCATCAAGATTCGAGATTAACCATCATCCATAGGGACTTGAAAACAAGTAACATTCTATTAGACAATGACTTGCTACCCAAAATTTCTGATTTTGGTTTAGCTCATATCTTTGAAGGAGATCTTTCAGCAGTAAAAGCAAAAAGTATTGTTGGGACATATGGTTATATATCACCTGAATATGCAGTACATGGGCTATTTTCTCCCAAATCTGATATATTTAGTTTTGGGGTTATAGTGTTGGAGATATTGAGTGGCATAAAAAATAGTCGTTACAGAAGTCCAGATCATTGCCGCAATCTGCTCGGGCAGGCATGGATACTGTGGAAAGGAGAACGACCATTGGACTTTATGGATCCAAACTGTGACAGGACAGATATGTCAACTGAACTAATCAAATGCCTGCAAATTGGTCTCTTATGTGTGCAAAAGTTCCCTGAAGATAGACCAACTATGCTGTCTGTGGTTTTCATGCTGTCCAATGAATGTATGACGCTTCCTGAACCAAAGTTGCCTGGGTTTTTCATGGAAGAGTTTGATGGTTATAGTCAGGACCACTGTAGTAACAATGCTATGACTATTACACTTCTGGAAGCCCGAAATTAA 2436 0.3953 MHNLLIFVFSFTHIFFLHKTSSAANTLSPNQSLIDGQELTSAGQLFVLGFFTPGTSKSRYVGIWYKNITPQTVVWVANGENPLNDSSGEFTIGADGNLVLLDGEEKTVWSSGPSRKIQDPIAKLLDSGNLVLIDGKGDSGSYIWQSFDHPTDTMLPGMRVGWDKNSGLNRYLTSWKGENDPSEGNFTYIFDHIEFPEIVIREGSIIKFRSGIWNGVGINGDILTSFTAFKPELLVTDNEAVYWNEPGDRLSRLVMRYDGQAERYIWDTQNSKWTSIYEARKDFCDNYGACGENGICDINSIPVFCNCLIGFKPKSQEEWNAFSWSGGCTRRTPLNCTQGDKFKKFSSVKLPMLLQYWTQDNMSIEECKMKCLENCSCTAYANSALNGGPHGCLIWFGNLVDMKLLQTKVGPQQDLYVRLAASEVGSTSTASKRKVAVVAISVSLALLVLCFIIFLAKKFKEKKMRKIVTANLGQRHHSEEQALPLFDMLTILAATNNFSKENQIGEGGFGPVYKGKMSDGQEIAVKRLSRTSKQGIKEFMNEVGFVAKFQHRNLVRVLGGCVQGEERMLVYEYMPNRSLDHFIFDPRGGNLLNWRKRYEIIMRIARGLLYLHQDSRLTIIHRDLKTSNILLDNDLLPKISDFGLAHIFEGDLSAVKAKSIVGTYGYISPEYAVHGLFSPKSDIFSFGVIVLEILSGIKNSRYRSPDHCRNLLGQAWILWKGERPLDFMDPNCDRTDMSTELIKCLQIGLLCVQKFPEDRPTMLSVVFMLSNECMTLPEPKLPGFFMEEFDGYSQDHCSNNAMTITLLEARN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3078g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 147 - -
Pral3078g00002 811 SMART serkin_6 498 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00002 811 Gene3D Phosphorylase Kinase; domain 1 457 573 - -
Pral3078g00002 811 ProSiteProfiles Protein kinase domain profile. 498 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00002 811 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral3078g00002 811 Gene3D - 18 148 IPR036426 -
Pral3078g00002 811 Pfam Protein kinase domain 498 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00002 811 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Pral3078g00002 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pral3078g00002 811 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Pral3078g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 573 - -
Pral3078g00002 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral3078g00002 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 760 - -
Pral3078g00002 811 Pfam Domain of unknown function (DUF3403) 771 810 IPR021820 GO:0004674
Pral3078g00002 811 ProSiteProfiles PAN/Apple domain profile. 336 420 IPR003609 -
Pral3078g00002 811 CDD PAN_AP_plant 332 420 - -
Pral3078g00002 811 CDD STKc_IRAK 504 769 - -
Pral3078g00002 811 SMART ntp_6 337 419 IPR003609 -
Pral3078g00002 811 SMART blect_4 30 150 IPR001480 -
Pral3078g00002 811 Pfam D-mannose binding lectin 72 176 IPR001480 -
Pral3078g00002 811 CDD B_lectin 30 150 IPR001480 -
Pral3078g00002 811 SUPERFAMILY Protein kinase-like (PK-like) 480 769 IPR011009 -
Pral3078g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Pral3078g00002 811 Pfam PAN-like domain 336 402 IPR003609 -
Pral3078g00002 811 PIRSF SRK 1 810 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3078g00002 Pral-Chr3078 20589 24634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3078g00002 437 785 Receptor kinase-like Gene Family AT4G23190 52.101 5.41e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3078g00002 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3078g00002 - - gmx:102669607 1133.63