Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3078g00001 ATGGGAGGTTTCACTAACCTCCTCTTCTTCCTTTTCTGGTTCTTCTTCATCACTTTCCTCTCTTTCTTCCCTGCAATTTCATTCTCCTCTGATACCTTGAACTCAACCCAATCTCTCAAAACCAACTGCACACTTTTATCGGCCAAGCAGACTTTCGTTCTGGGTTTCTTCTCTCTAGATGAATCAAGATACTACCTAGGAATCTGGTACAAGAACATTTCAGATCTTACAGTGGTTTGGGTCGCAAACAGAGACAACCCGCTTGAGGATTCAAATGGGTTTCTGAAGATCGGAAACAAAGGAAACATGGAGATTGTGGATCGAACAGGCAAACCCATATGGTCATCAAACCAAACCATCTCTGCGAAAAACCCGGTTCTTCAGATTCTCGATTCAGGGAATCTGGTTATCAGAGAATCTTCTGCATCTGCCTCGAATTCCTTATGGCATAGCTTCGATTACCCCACAGACACGCTCTTGCCTGGCATGAAGCTTCTTTATAACTTTGACACAAAAATAGAGAGGCATATAACTTCATGGAGCTCAAAAGAAGATCCATCTACAGGCGTTATCTCTTTCAAGCTCGATTTCCATGGCCTCCCAGAGATTTTCCTATGGAAGAATAAGACAAAATTGTACAGAAGTGGACCTTGGAATGGTGTAAGATTTAGTGGGGTTCCGGAAATGAAATCAGGGACAGACACAATCGAGTTCGATTTTTACGAGGATGAACACCAAGTATACTACACATTCAAAATTGGAAGCCATCCATTGTATTCCAGACTCACTGTAACCCCAGATGGTGAGCTTCAACGCTTAACCTGGGTACCAGATAACCAAGTTTGGACCCAATTTTGGATTGCTCCGAAAGACCAATGCGATAACTACAAAGAATGTGGCCCTTATGGGATATGTGATACAAACGCTTCACCAGTTTGTACTTGCACGAGAGGATTCAGTCCTAAGAACATTCAAGCCTGGAATCTGAGAGATGGGTCCGATGGATGTGTGAGGGACACAAAGTTAGATTGTGGGACTGATAAGTTCTTGAAGGTGCAGAACGTGAAGTTGCCGGATACAACCTCGGTGTTTGTTAATAAAAGTATGAATCTAGTTGAGTGTGCAGGTTTGTGTCAGAAGAATTGTTCATGTACAGCTTATGCGAACATATATATCACCAATGGAGGATCCGGGTGTGTTATGTGGTCTGATGAACTCATAGATATGAGGGTTTATACTGCTGGAGGCCAAGATCTGTATGTCAGATTAGCAGCTTCTGATGTAGAATCCGCAGGTGGATCTAAGAACAATGTGGAATCTAAGGCTATAGGCATTACGGTTGCCATAGCTGTTGTACTAGCGGGATTACTCATCTATTTCCTCTGGAAGAGAAGGGAATTGCAAAGAATGTTGAAAGGGAGGTCTGAATCTGGAGGTGGGTTTGAGAGAAGTCAAGATTCTCTAAAGAATGAGTCAGTGTTCACAAGTACTAGAGGAAACTCTGGCGAAGATGAGATGGATGAACTGGAGTTGCCATTGTTTGATTTTAACACCATATCAATGGCTACAAATAACTTCTCTGAAGAAAACAAGCTTGGAGAAGGAGGCTTTGGTAGTGTTTACAGGGGTAGATTAATGGAAGGCCAAGAAATTGCGGTGAAAAGGTTATCCAGAAATTCTGGGCAAGGAACTGAACAATTTAAGAATGAAGTCAGGTTAATTGCGAGACTTCAACATCGTAATCTTGTTCGGTTGTTTGGCTGTTGTGTTGAGATGGATGAGAAGATGCTGGTTTATGAGTACATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGATAAAGCAAGGAGATCCATATTGAATTGGCAAAAGCGTTTCTACATCATATGTGGAATTGCAAGAGGACTTCTTTACCTGCATCAAGATTCTAGATTTAGGATCATTCATAGGGATCTTAAGGCCAGCAATGTCCTACTCGACGAACAAATGAATCCAAAGATATCAGATTTTGGGATGGCAAGAATATTTGGAACAAATCAAACAGAAGCAAATACATTGAGAGTTGTTGGGACATACGGCTATATGTCTCCAGAGTATGCCATGGATGGACTCTTCTCAATAAAGTCCGATGTATTTAGTTTTGGGGTTCTAGTACTCGAGATCATAACTGGCAGGAAGAACAGAGGGTTTTATTACTCAAATGATGAATTGAATCTTCTTGGACATGCATGGAGTCAATGGAAAGAAGGAAAAGCACTTGAACTCATCGATCCATCGATTGCAGATTCATATTCGCCATCCGAAGTGCTTCGATGCGTGCAGGTTGGGCTCCTGTGTGTTCAAGAGCGCGCGGAAGATAGACCAACAATGGCCACTGTGGTATTGATGTTGAGTAGTGAAACTGTACTGATGCCACAGCCTAAAAGCCCTGGGTTTTGTGTGGGAAGGAACCCTAATGAAACAGAAACGTCTTCAAGTAAGCAAGACCAATCATACAGTGTGAATGAAGTTACTGTCACAATGCTACATGCTAGGTAG 2538 0.4208 MGGFTNLLFFLFWFFFITFLSFFPAISFSSDTLNSTQSLKTNCTLLSAKQTFVLGFFSLDESRYYLGIWYKNISDLTVVWVANRDNPLEDSNGFLKIGNKGNMEIVDRTGKPIWSSNQTISAKNPVLQILDSGNLVIRESSASASNSLWHSFDYPTDTLLPGMKLLYNFDTKIERHITSWSSKEDPSTGVISFKLDFHGLPEIFLWKNKTKLYRSGPWNGVRFSGVPEMKSGTDTIEFDFYEDEHQVYYTFKIGSHPLYSRLTVTPDGELQRLTWVPDNQVWTQFWIAPKDQCDNYKECGPYGICDTNASPVCTCTRGFSPKNIQAWNLRDGSDGCVRDTKLDCGTDKFLKVQNVKLPDTTSVFVNKSMNLVECAGLCQKNCSCTAYANIYITNGGSGCVMWSDELIDMRVYTAGGQDLYVRLAASDVESAGGSKNNVESKAIGITVAIAVVLAGLLIYFLWKRRELQRMLKGRSESGGGFERSQDSLKNESVFTSTRGNSGEDEMDELELPLFDFNTISMATNNFSEENKLGEGGFGSVYRGRLMEGQEIAVKRLSRNSGQGTEQFKNEVRLIARLQHRNLVRLFGCCVEMDEKMLVYEYMENRSLDSILFDKARRSILNWQKRFYIICGIARGLLYLHQDSRFRIIHRDLKASNVLLDEQMNPKISDFGMARIFGTNQTEANTLRVVGTYGYMSPEYAMDGLFSIKSDVFSFGVLVLEIITGRKNRGFYYSNDELNLLGHAWSQWKEGKALELIDPSIADSYSPSEVLRCVQVGLLCVQERAEDRPTMATVVLMLSSETVLMPQPKSPGFCVGRNPNETETSSSKQDQSYSVNEVTVTMLHAR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3078g00001 845 Gene3D Transferase(Phosphotransferase) domain 1 602 804 - -
Pral3078g00001 845 ProSiteProfiles Protein kinase domain profile. 526 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00001 845 MobiDBLite consensus disorder prediction 474 504 - -
Pral3078g00001 845 MobiDBLite consensus disorder prediction 480 500 - -
Pral3078g00001 845 Pfam D-mannose binding lectin 77 180 IPR001480 -
Pral3078g00001 845 SUPERFAMILY Protein kinase-like (PK-like) 505 797 IPR011009 -
Pral3078g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 490 601 - -
Pral3078g00001 845 MobiDBLite consensus disorder prediction 808 832 - -
Pral3078g00001 845 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
Pral3078g00001 845 CDD PAN_AP_plant 340 424 - -
Pral3078g00001 845 Gene3D Phosphorylase Kinase; domain 1 501 601 - -
Pral3078g00001 845 Pfam Domain of unknown function (DUF3403) 799 845 IPR021820 GO:0004674
Pral3078g00001 845 CDD STKc_IRAK 532 797 - -
Pral3078g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 805 - -
Pral3078g00001 845 MobiDBLite consensus disorder prediction 816 832 - -
Pral3078g00001 845 SMART blect_4 36 155 IPR001480 -
Pral3078g00001 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pral3078g00001 845 Pfam Receptor serine/threonine kinase 482 516 IPR022126 GO:0004674
Pral3078g00001 845 PIRSF SRK 3 845 IPR024171 GO:0004674
Pral3078g00001 845 SMART serkin_6 526 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3078g00001 845 CDD B_lectin 36 155 IPR001480 -
Pral3078g00001 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 788 - -
Pral3078g00001 845 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Pral3078g00001 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 186 IPR036426 -
Pral3078g00001 845 Pfam PAN-like domain 344 409 IPR003609 -
Pral3078g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 152 - -
Pral3078g00001 845 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Pral3078g00001 845 Gene3D - 25 152 IPR036426 -
Pral3078g00001 845 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Pral3078g00001 845 Pfam Protein tyrosine and serine/threonine kinase 529 795 IPR001245 GO:0004672|GO:0006468
Pral3078g00001 845 SMART ntp_6 344 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3078g00001 Pral-Chr3078 11583 17022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3078g00001 503 841 Receptor kinase-like Gene Family AT4G23150 57.817 3.10e-134 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3078g00001 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3078g00001 - - gmx:106799702 1195.65