Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3068g00012 ATGTTGAATTTTCAATGTATTTGCTTTCTTCTTGTTCTTCTTTTCCTTCTGCAGAATCCTTCTGCAACATTGTGCCATACCAAGGGACTTAGACCCGGCCGCCGTTTTCCGGGCCTTGGGTTATCCATCAACAGGACCCAAGTCCAGAATTCAGAGCAGCAATTCATGAAATGGGTTAACTTTGTTGGTAGCCTCAAGCATTCTGTCTTTAAGACTGCAAAAAACAAGCTTTTTCCTTCTTACACACTTCACGTCTCCAAGAATCCTGCCGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTGGCATCAATCTCGTGAGAGTGGTAATTAAGGTTCATGCAGGTGTTTACACTGAGAAAGTGTACATCCCTCCCATGAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGATAGCACCATAGTTCAATGGGGTGACACAGCTCAAACACCAGGTCCCAGAGGACAGCCATTAGGAACATATGGTTCTGCAACATTTGGAGTGAACTCACCTTATTTCATCGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCAGCACCAGGAGCAGTAGGGAAGCAAGCCGTGGCATTAAGGGTATCAGCAGACACAGCATCATTCTACGGATGCAAAATCCTAGGAGCACAGGACACATTATATGACCATGAGGGTAGACATTATTACAAGGACTGTTACATTGAAGGCTCTGTGGATTTCATATTTGGGAACGCCCTGTCTCTGTTTGAGGGATGTCACGTGCATGCGATAGCACAGAAGATAGGGGCCTTAACAGCACAAGGAAGAAGCAGCATGTTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAAGTCACAGGTTCAGGAGCACTGTACCTTGGAAGGGCTTGGGGTCCATTTTCTCGTGTGGTTTTTGCTTATACTTACATGGACAACATCATCCTTCCCAAGGGCTGGTATAACTGGGGCGACCCCAACCGAGAAATGACAGTATTTTATGGGCAATACAAGTGCACAGGACAAGGAGCTAGCTTCGCAGGCAGAGTCTCATGGTGTAAAGAACTAACCGATGAGGAAGCTGAGCCTTTTATTTCCCTTAGCTTCATTGATGGCGATGAGTGGACCAAATTATAG 1146 0.4538 MLNFQCICFLLVLLFLLQNPSATLCHTKGLRPGRRFPGLGLSINRTQVQNSEQQFMKWVNFVGSLKHSVFKTAKNKLFPSYTLHVSKNPAVADFATIQEAIDSLPGINLVRVVIKVHAGVYTEKVYIPPMKSFITIEGAGADSTIVQWGDTAQTPGPRGQPLGTYGSATFGVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRVSADTASFYGCKILGAQDTLYDHEGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQKIGALTAQGRSSMLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIILPKGWYNWGDPNREMTVFYGQYKCTGQGASFAGRVSWCKELTDEEAEPFISLSFIDGDEWTKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3068g00012 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 379 - -
Pral3068g00012 381 Gene3D - 79 381 IPR012334 -
Pral3068g00012 381 FunFam Pectinesterase 79 381 - -
Pral3068g00012 381 Pfam Pectinesterase 92 376 IPR000070 GO:0030599|GO:0042545
Pral3068g00012 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Pral3068g00012 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3068g00012 Pral-Chr3068 57158 62582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3068g00012 1 378 Carbohydrate Esterase AT5G47500 41.689 4.90e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3068g00012 K01051 - qsa:O6P43_007857 640.188