Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3068g00011 ATGGGAAGAGCGACAAGATGGTTGAAGGGGTTGTTCGGCATGAAGAAAGACAGAGATAAGAAACAGAATTCAAACTCCGACTACAGTGGGAATTTGAAATCTGTGGCGGCGCCGTTGGCTGCACCACCCAATCTTTCACCTGCAGAGGCTGCTTGGCTTCAGTCATTCTACGGAGAAACAGAGGACCGGCAGAACAAACACGCCATTGCTGTGGCAGCTGCCACTGCAGCAGCAGCCGACGCCGCCGTCGCAGCCGCCCAGGCGGCAGTAGCCGTAGTGAGGCTGACCAGTCACGGCAGAACCACCATGGTCGGCCGTGGACACGAGAAATTTGCAGCCGTCAAGATTCAAACAGTATTCAGGGGATTCTTGGCAAGGAAGGCATTAAGAGCATTGAAAGGATTAGTGAAGATCCAAGCACTTGTGAGAGGATTTCTGGTCCGAAAGCAAGCAACGGCGACACTACACAGCATGCAAGCTCTGATAAGAGCTCAAGCCACAGTTCGATCTCATAAAGCTCGTCAAGTTATGAACAAAACCGACGAATCATACAAATGTGAACCTCAAGCTCGAAGATCCACGGAGAGATTCGATGAAAGTATGAGGTTATCTTCTTCCTTCGACGCTTCGATGAATAACAACACTAACAGTACTGATGGGAGTCCGACGCCGAAGATAGTGGAGATGGACACAGGCGGCTACCGGCCGAAGTCAAGGTCTCGCCGGAGCAACACATCAATGTCGGATTTTGGCGACGACCCATTGTTCCAAACAGTGTCTTCTCCGATCCCACTCCCACAAATTCGAACCCCAGCTCGGATATCAATGGCAGATCGGAGGGTTTCACCGGAGACGGAGTGGGGACTAACAGGGGAAGAATGTAAGTTCTCTACAGCACAGAGCACTCCACGTTTCACCAATACGTGTTCTTGTGGATCAGTCGCCGTCACACCCAAGAGTGTCTGTGCAGAAAGATTGGTCTGGCAATATGGAAACCACCCAAGTTACATGGCGAATACTCAGTCTTCGAAGGCGAAATTGAGGTCTCGGAGTGCTCCGAAGCAGCGGCCGGAATCCGGCGGAGGAGCAAAGAAGAGGCTTTCGTTGAATGAAATGATGGAGTCTAGGAGTAGTTTGAGTGGGGTTAGGATGCAGAGGAGTTGTTCAAAAGTTCAGGAAGCCATTAATTTCAAGAATGCTGTGATGGGAAAGATTGACAAATCTGGAGAGATTGGGAGAGATAGATCTGGAGAGATTGGGAGAGATAGTTACTACTTGCAGAGGAGGTGGTATGGCGATTGA 1302 0.5031 MGRATRWLKGLFGMKKDRDKKQNSNSDYSGNLKSVAAPLAAPPNLSPAEAAWLQSFYGETEDRQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRTTMVGRGHEKFAAVKIQTVFRGFLARKALRALKGLVKIQALVRGFLVRKQATATLHSMQALIRAQATVRSHKARQVMNKTDESYKCEPQARRSTERFDESMRLSSSFDASMNNNTNSTDGSPTPKIVEMDTGGYRPKSRSRRSNTSMSDFGDDPLFQTVSSPIPLPQIRTPARISMADRRVSPETEWGLTGEECKFSTAQSTPRFTNTCSCGSVAVTPKSVCAERLVWQYGNHPSYMANTQSSKAKLRSRSAPKQRPESGGGAKKRLSLNEMMESRSSLSGVRMQRSCSKVQEAINFKNAVMGKIDKSGEIGRDRSGEIGRDSYYLQRRWYGD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3068g00011 433 Pfam Protein of unknown function (DUF4005) 302 390 IPR025064 -
Pral3068g00011 433 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Pral3068g00011 433 MobiDBLite consensus disorder prediction 174 269 - -
Pral3068g00011 433 MobiDBLite consensus disorder prediction 10 24 - -
Pral3068g00011 433 MobiDBLite consensus disorder prediction 238 265 - -
Pral3068g00011 433 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Pral3068g00011 433 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Pral3068g00011 433 MobiDBLite consensus disorder prediction 9 29 - -
Pral3068g00011 433 ProSiteProfiles IQ motif profile. 157 185 IPR000048 GO:0005515
Pral3068g00011 433 MobiDBLite consensus disorder prediction 174 202 - -
Pral3068g00011 433 MobiDBLite consensus disorder prediction 339 383 - -
Pral3068g00011 433 SMART iq_5 131 152 IPR000048 GO:0005515
Pral3068g00011 433 SMART iq_5 108 130 IPR000048 GO:0005515
Pral3068g00011 433 MobiDBLite consensus disorder prediction 203 224 - -
Pral3068g00011 433 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Pral3068g00011 433 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Pral3068g00011 433 Gene3D - 109 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3068g00011 Pral-Chr3068 42676 44584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3068g00011 1 384 IQD Protein Family AT3G16490 50.000 3.72e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3068g00011 - - tcc:18588500 479.559