Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3068g00002 ATGCCAGATTACTTATACTCCATTTTCTTCTTCTTCTGTTGCTTTTTTGCTGTTCTAAGTGATGCTGAGACTAATATGTCTCATCTCTATGATCAAGAACATGCAGTCCTACTGAACATAAAACAACACCTTCATCCATTCCTCGATCAGTGGGCCCCATCGGATTCCTCTCATTGTTCTTGGCCTGGCATCAACTGCACCCATGATTCTGTCACAAAATTAGATTTTGGTGACTGGAACATCACCAAAACGATGCCTCCTTTCCTCTGTGACCTTAGAAATCTCACCCTTATTGATTTTCAGCTTAATTATTTCCCTGGGGAGTTCCCAAAATTTCTCTACAATTGCTCCAAGCTTGAGTACCTAGACCTCTCCCTGAACAACTTTTCGGGTCCGATTCCAAATGACATTGACCGATTAGCCAAACTGCGTTTCCTTAATCTTGGTGAAAACGAATTCTCTGGCAGCATACCAGCCGGCATCGGAAGGTTGAAGGAGCTGAGAAGTCTTCAACTTCACATGTGTGAGTTTAGCGGCAGTATCCCTGATGAAATAGGCTACTTGTCCAATCTTGAATTGCTATACTTGTGGGGAAACAAGAATTTGATTGGGAAAATTCCAGAAAGTATTGGAGAACTGGTCAATTTGGTGGAATTGGATTTATCACAGAATGGCTTAAGTGGGCAAATCCCCAGTGGTGTGTTTTCTCTGAAGAATCTCAGCATATTGTATCTTTGGAAAAACAGCCTATCTGGGGAAATACCTACAAAAATTGAAGCTTTGAATCTGACTATACTCGATGTTTCACGCAACATTCTTACTGGAAAAATCCCAGACGGTTTAGGAAAGCTCAAAAAACTGACAGGCTTGAGTTTGGATATGAATCAACTATCAGGAGAGATACCTGAAAGCCTTGCTCATCTACCAGCTCTAGTAGATTTCATGGTTTTCCAAAACCATCTATCAGGCACTCTTCCTCCTTACTTCGGTCGTTATTCGCCACTCGAAACCTTCCAAGTTGCAACCAATCAATTGACAGGAAAATTGCCAGAGGATTTATGTTACAAGGGCAAGTTAGTTGGTGTAAGTGCTAATGACAACAATCTAAGTGGGGAGCTGTCAGAATCACTAGGGAGCTGCAATAGCCTGCAATACTTGTTTCTTGATAATAATAGTTTTTTCGGCAAAATCCCTGGCGGCCTTTGGACATCACAGAATTTGGTGGCTTTAATGGTCAACAACAACGAGTTCACTGGCGAACTACCTCAAAGATTGGCTTGGAATCTTTCAAGTTTGTCCATCAGCAACAATCAATTCTCTGGTAGAATTCCGACAGGAGTATCTACCTGGAAGAATCTGATCGAGTTTAAAGCTAGTAAGAATTTCTTCAATGGAAGTATTCCGCAAGAGCTTACGACTCTTCCTAAGCTAACAAAATTGTTGCTTGATCAAAACCAGCTAACAGGGCCACTTCCATCAGAAATCATATCTTGGAAATCTCTCAATGCCCTAAATTTAAGCCACAATCAACTCTCTGGACAAATCCCATATTCTTTTGATAGCTTACCTGTCCTAGGACAATTAGATTTGTCAAATAATCAGCTCTCCGGTCATGTTCCACCTCAACTTGGTAAATTGTCAATGACCCTCACAAACCTCAATCTCTCCTCAAATTTTTTCACTGGGAAGATTCCTCGTGAATTTGAAAACCTTGTCTATTCCGATAGCTTTCTAAACAATTCTGGTCTCTGTGCTAATACCAAAAGGTTAAACCTTCCCTTGTGCAATTCTGGTTCTGACCTTCAAAGATCAAGCAACAGATCATCTGTGTCTCTTGCTTTGATCATAGGCCTAGTGATAGTGGCCTCTTTAGCAACCTTCTTGAGTTTACTCTTAATTATTAGAGTATACAAATCAAGAAAGCAAGAACTAGAAACTTCATGGAAGTTGACTTCCTTTCACAGGTTTAGTTTCAGTGGAATGAACATTGTATCATCACTGACAGATGACAATATTATAGGCAGAGGTGGGTTTGGTACAGTATATCAAGTCCCTATAGACGGTTTAGGCTATGTTGCTGTAAAGAGGATAATGAACAACAAGAAGTGGGATCAGAAACTTGAGGATGCATTCCTAGCAGAAGTTAAGATTTTGAGCAATATTCGTCACAACAATATTGTGAAGCTGTTGTGTTGTATTTCAAGCGAGGATTCTTTGATGCTTGTGTATGAATATCTAGAAAACAATAGCCTTGACCGTTGGTTGAGCAAGAAGAATAGGTTAAACCATAATGTTATTCTTGATTGGCCAAAAAGATTGCAGATAGCCATAGGAGCTGCACAAGGTCTAACCTATATGCACAATGATTGCTTCCCTCCGGTCATTCATCGTGATATTAAAATAAGTAACATCCTTTTGGATTCGGAATTCAATGCAAAAGTCGCAGACTTTGGTCTAGCAAGAATGTTGATCAAGCCAAGTGAACTCACCATGTCAGGTGTAGCTGGATCATTTGGCTATATTGCTCCAGAATATATTCAAACAGGAAAAATCAATGAAATGATCGATGTGTATAGCTTTGGGGTGGTGTTGCTGGAACTAACAACTGCAAAAGAAGCAAATTACGGAGATGAACACTCATCTCTCGCAGATTGGGCATGTCGCCATGTGCAGTTGGGTGGAGATGTAGAAGAAGTTCTAGATGACGAAATTAAGGAAGCATGCTATATGGATGAAATATGCGGCGTGTTCAAGCTTGGTGTGATGTGTACTGCAATACTACCAGCCAGTAGGCCTTCTATGAAGGAGGTTCTGCAAATATTGCTTCGTTGCAGGGACCCATTTGGTTATGGAGAAAGGAGTCCTGGAATCTTTCATGTTGTCCCTCTGTTAAAGAATTCCAAGAGGGAAAGTAGATTGGATATTGATGATGATTTATAG 2940 0.4044 MPDYLYSIFFFFCCFFAVLSDAETNMSHLYDQEHAVLLNIKQHLHPFLDQWAPSDSSHCSWPGINCTHDSVTKLDFGDWNITKTMPPFLCDLRNLTLIDFQLNYFPGEFPKFLYNCSKLEYLDLSLNNFSGPIPNDIDRLAKLRFLNLGENEFSGSIPAGIGRLKELRSLQLHMCEFSGSIPDEIGYLSNLELLYLWGNKNLIGKIPESIGELVNLVELDLSQNGLSGQIPSGVFSLKNLSILYLWKNSLSGEIPTKIEALNLTILDVSRNILTGKIPDGLGKLKKLTGLSLDMNQLSGEIPESLAHLPALVDFMVFQNHLSGTLPPYFGRYSPLETFQVATNQLTGKLPEDLCYKGKLVGVSANDNNLSGELSESLGSCNSLQYLFLDNNSFFGKIPGGLWTSQNLVALMVNNNEFTGELPQRLAWNLSSLSISNNQFSGRIPTGVSTWKNLIEFKASKNFFNGSIPQELTTLPKLTKLLLDQNQLTGPLPSEIISWKSLNALNLSHNQLSGQIPYSFDSLPVLGQLDLSNNQLSGHVPPQLGKLSMTLTNLNLSSNFFTGKIPREFENLVYSDSFLNNSGLCANTKRLNLPLCNSGSDLQRSSNRSSVSLALIIGLVIVASLATFLSLLLIIRVYKSRKQELETSWKLTSFHRFSFSGMNIVSSLTDDNIIGRGGFGTVYQVPIDGLGYVAVKRIMNNKKWDQKLEDAFLAEVKILSNIRHNNIVKLLCCISSEDSLMLVYEYLENNSLDRWLSKKNRLNHNVILDWPKRLQIAIGAAQGLTYMHNDCFPPVIHRDIKISNILLDSEFNAKVADFGLARMLIKPSELTMSGVAGSFGYIAPEYIQTGKINEMIDVYSFGVVLLELTTAKEANYGDEHSSLADWACRHVQLGGDVEEVLDDEIKEACYMDEICGVFKLGVMCTAILPASRPSMKEVLQILLRCRDPFGYGERSPGIFHVVPLLKNSKRESRLDIDDDL 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3068g00002 979 SUPERFAMILY RNI-like 277 596 - -
Pral3068g00002 979 ProSiteProfiles Protein kinase domain profile. 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3068g00002 979 Gene3D Ribonuclease Inhibitor 356 468 IPR032675 -
Pral3068g00002 979 Gene3D Ribonuclease Inhibitor 469 592 IPR032675 -
Pral3068g00002 979 FunFam Leucine-rich repeat receptor-like protein kinase TDR 281 597 - -
Pral3068g00002 979 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 277 - -
Pral3068g00002 979 Pfam Leucine Rich Repeat 262 284 IPR001611 GO:0005515
Pral3068g00002 979 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515
Pral3068g00002 979 Gene3D Ribonuclease Inhibitor 30 182 IPR032675 -
Pral3068g00002 979 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Pral3068g00002 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 746 954 - -
Pral3068g00002 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 236 941 - -
Pral3068g00002 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Pral3068g00002 979 SMART LRR_typ_2 522 546 IPR003591 -
Pral3068g00002 979 SMART LRR_typ_2 284 308 IPR003591 -
Pral3068g00002 979 SMART LRR_typ_2 474 498 IPR003591 -
Pral3068g00002 979 SMART LRR_typ_2 213 237 IPR003591 -
Pral3068g00002 979 SMART LRR_typ_2 140 164 IPR003591 -
Pral3068g00002 979 SUPERFAMILY L domain-like 48 370 - -
Pral3068g00002 979 Pfam Protein kinase domain 669 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3068g00002 979 Gene3D Ribonuclease Inhibitor 183 355 IPR032675 -
Pral3068g00002 979 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 30 185 - -
Pral3068g00002 979 Gene3D Transferase(Phosphotransferase) domain 1 746 948 - -
Pral3068g00002 979 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Pral3068g00002 979 SMART serkin_6 667 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3068g00002 979 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Pral3068g00002 979 Gene3D Phosphorylase Kinase; domain 1 637 745 - -
Pral3068g00002 979 Pfam Leucine rich repeat 498 535 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3068g00002 Pral-Chr3068 11685 16352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3068g00002 33 979 Receptor kinase-like Gene Family AT5G25930 50.051 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3068g00002 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3068g00002 - - gmx:100785907 1210.28