Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3065g00004 ATGGCTTTTCAAGATTCTTCCTTTCTTCTCGATTCTCTCTACTGTCATGAGCCCAACCTGGATGAACAAGACGACGAACAAGAACACCCACAATCAGAGTTATCAGATGAAACTGATCTCTCGAACAATAATGCTTCTCTGTTTCCTCTGCTTCTGTTGGAGCAAGATTTGTTCTGGGAAGACCAAGACCTCATCTCTCTCTTCACCAAAGAACAGCAACAACATCAAGAAGTTGCCAACTTCAACCTGGGTAATCTGGAATTTTCAGGCTCTCGCCTCTCCTTGGCTCGTCGTGAAGCTGTGGAGTGGATTCTTAAGGTGAATACTCACCATGGCTTCTCTGCTCTTACTTCAACTCTGGCCATTAATTACTTGGATAGGTTCATTTTAAGCTTCAAAATTGAAATAGAGAAGCCATGGATGATCCAACTGGTGGCTGTCACTTGCCTTTCTTTAGCTGCAAAGGTCGAAGAGACACAACTCCCTCCTCTTCTAGACCTCCAAGTGGAAGGTACGAAGTATGTGTTCGAGGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTTTATCGACCCTGAAATGGAAGATGCACCCAGTGACACCATTATCGTTCTTAGATCACATCATTAGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCAAGCGTTGTGAGCATCTTCTTCTATCAGCACTTTCAGATTCAAGATTCGTGGGCTGTCTTCCTTCTGTGTTGGCCACAGCCACAATGCTTCGTGTTATAGAGCAGATACAGCACAATGATGCAGCTGAATACAAAAAACAACTCCTGGATGTGCTTAAAATCAACAAGGAGAAAGTAGAGGAGTGTTATAAAGCAATTCTCGAGGCGTCTGATAATAAGAATAGAAAGAAGAGAAAGCATGATGAAAGAATAATAATCCCTGTGAACCTAAGTGGCTTAATCGATGGTGGAGTTGGGACCGATGAAGGATCCAACGGTTCGTGGAAAGTGGGGTCATCTTCATCATTATGTTCTTCACCAGATCAGTCTCTGTTGAAGAGGAACAGAGCTCAGCAACAGCATCAACAACAACAGCGTAATATGAAGTTGTCTCCATTGAATCTGGTTGGTGTTGCAATTGTTGTCTCATCTCCTAAATAA 1149 0.4308 MAFQDSSFLLDSLYCHEPNLDEQDDEQEHPQSELSDETDLSNNNASLFPLLLLEQDLFWEDQDLISLFTKEQQQHQEVANFNLGNLEFSGSRLSLARREAVEWILKVNTHHGFSALTSTLAINYLDRFILSFKIEIEKPWMIQLVAVTCLSLAAKVEETQLPPLLDLQVEGTKYVFEGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEHLLLSALSDSRFVGCLPSVLATATMLRVIEQIQHNDAAEYKKQLLDVLKINKEKVEECYKAILEASDNKNRKKRKHDERIIIPVNLSGLIDGGVGTDEGSNGSWKVGSSSSLCSSPDQSLLKRNRAQQQHQQQQRNMKLSPLNLVGVAIVVSSPK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3065g00004 382 SMART cyclin_7 203 291 IPR013763 -
Pral3065g00004 382 SMART cyclin_7 102 190 IPR013763 -
Pral3065g00004 382 Gene3D - 198 289 - -
Pral3065g00004 382 FunFam CYCLIN D32 198 287 - -
Pral3065g00004 382 SUPERFAMILY Cyclin-like 200 293 IPR036915 -
Pral3065g00004 382 Pfam Cyclin, C-terminal domain 199 303 IPR004367 -
Pral3065g00004 382 MobiDBLite consensus disorder prediction 327 365 - -
Pral3065g00004 382 FunFam D6-type cyclin 81 197 - -
Pral3065g00004 382 PANTHER CYCLINS 43 296 IPR039361 -
Pral3065g00004 382 CDD CYCLIN_AtCycD-like_rpt2 199 289 - -
Pral3065g00004 382 MobiDBLite consensus disorder prediction 22 41 - -
Pral3065g00004 382 SMART Cyclin_C_2 199 310 IPR004367 -
Pral3065g00004 382 SUPERFAMILY Cyclin-like 67 197 IPR036915 -
Pral3065g00004 382 CDD CYCLIN_AtCycD-like_rpt1 96 194 - -
Pral3065g00004 382 Pfam Cyclin, N-terminal domain 96 196 IPR006671 -
Pral3065g00004 382 Gene3D - 96 197 - -
Pral3065g00004 382 MobiDBLite consensus disorder prediction 328 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3065g00004 Pral-Chr3065 15017 28722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3065g00004 4 291 Core Cell Cycle Gene Families AT4G34160 56.250 1.12e-107 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3065g00004 K14505 - gmx:547740 413.69