Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3065g00001 ATGGACGCCATCTCTTACTGTATCGTTTCACTCATATTATCTTCTTCCTTACTTCACCCATCACTCTCAGCTCTTTCTGCAGAACTCCCTCGTTCTGAAAGAGAAGCATTAGAGATCATCATCGGAGGCGGAGGCGCCCCTTCTCCTCCCGCCGACTGTCCCCCTCCGCCGCCTCCGCCACCTCCGCCGCCTCCGCCGCCTCCGCCGCCTCCGCCGCCTCCGCCGCCTCCGCCGCCTCCGCCGCCTCCGCCGCTGTCTCGCCGGCTGGTGAGCGCACGCCGTGTGCTTCTGAAATTTGCCAAGACAGTTGACGACCCCAATTGCTTCACCCGAAGCTGGAAGGCTGAAGACAGCCCCTGTAACTACAAGGGTGTTAGATGCGCGGATTACCCATATGGGAATAAGGAGAGAGCCGTTGCAGGATTAGATTTCAACCAAGCTGGTTTTTCTGGTCGTCAAGGTTCAAGATTGAGTCTTTCAGGAATCTTGGGTTCGATTCGAGAGTTGACATTCTTCCATGTCAACTCCAACAATTTCTCAGGACAGGTCCCCGCAGAAATCAGTAATTCCAAATTTTTCTTCGAGCTTGATTTAAGCAACAACAAGCTCGAAGGTTGTTTCCCAATGGAAGCTCTTTCAAATAATCAGATACTTTTCTTAGATCTCAGGTTCAATGACCTCACTGGACCAGTCCCTCCGAAGCTCTTCACCATGGATCTAGACGTCATCTTCATCAACAACAACAAATTCAGCAGCAAACTTCCGTGGAATTTCGGAAACACACCTGCAAGATACCTCACATTCGCCAACAACAGATTCACGGGACCAATCCCAAGTAGCATAGGAAATGCTTCGAAGACTTTGACGGAAGTTCTCTTCCTGGGAAACCAGTTTTCTGGGTGTCTACCTTACGAGATTGGGTTCCTGAAAAAAGCTGTAGTCTTCGATGTGAGCAAGAACTCATTGACTGGTCCAATCCCAGAATCTTTTGCATGCTTACAGAAGATTCGCTTCCTGAATTTAGCTAACAACAAATTCTACGGCGCTGTTCCGGAATCAGTGTGCGAGCTTCCTGGAATTTGCAACAACGGGAATCTTACCTTGGCGGGTAACTATTTCACTTACGTGGGACCAAAATGCAAGAAGCTGATAGATTCTAAGGTGCTTGATGTGAGCCAGAATTGCATAAAGGGGCTTCCCAATCAGAAATCACCAGAAGAATGTCACAAGTTTCTATCTTGCGTGAAACCATGCCCGAATGAATGGTCTCTCAAGCTTGTTCCGTGTAAGAAAGGCTCTTATTCCAAGTACGATGAAACGGCGCCGCCTCCCGCGCCTGTGACGTACGAGACACTGAAGCCGACACGCCATCGTTTAATGTGA 1383 0.4946 MDAISYCIVSLILSSSLLHPSLSALSAELPRSEREALEIIIGGGGAPSPPADCPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLSRRLVSARRVLLKFAKTVDDPNCFTRSWKAEDSPCNYKGVRCADYPYGNKERAVAGLDFNQAGFSGRQGSRLSLSGILGSIRELTFFHVNSNNFSGQVPAEISNSKFFFELDLSNNKLEGCFPMEALSNNQILFLDLRFNDLTGPVPPKLFTMDLDVIFINNNKFSSKLPWNFGNTPARYLTFANNRFTGPIPSSIGNASKTLTEVLFLGNQFSGCLPYEIGFLKKAVVFDVSKNSLTGPIPESFACLQKIRFLNLANNKFYGAVPESVCELPGICNNGNLTLAGNYFTYVGPKCKKLIDSKVLDVSQNCIKGLPNQKSPEECHKFLSCVKPCPNEWSLKLVPCKKGSYSKYDETAPPPAPVTYETLKPTRHRLM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3065g00001 460 MobiDBLite consensus disorder prediction 48 86 - -
Pral3065g00001 460 SUPERFAMILY L domain-like 90 397 - -
Pral3065g00001 460 Pfam Leucine rich repeat N-terminal domain 93 127 IPR013210 -
Pral3065g00001 460 Gene3D Ribonuclease Inhibitor 263 420 IPR032675 -
Pral3065g00001 460 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 88 446 - -
Pral3065g00001 460 MobiDBLite consensus disorder prediction 40 86 - -
Pral3065g00001 460 Gene3D Ribonuclease Inhibitor 91 262 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3065g00001 Pral-Chr3065 1106 2844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3065g00001 88 413 Leucine-rich Repeat extension Gene Families AT4G13340 43.425 3.15e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3065g00001 - - gmx:100781083 468.388