Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3063g00002 ATGGATAACGTTCTGGGTCTTCTCAAACTTCGTATCAAAAGAGGTATTTCTCTCGCGATTCGTGATACTCGTAGCAGTGATCCTTATGTCGTTGCCACCTTGGGCGACCAGAAAGTGAAGACTCGTGTCGTGAAGAATAACCGCAACCCTCAGTGGGATGATGAATTGACACTCTCTGTTAAGGACGTCAACTCTCCAGTTCATCTTGCAGTTTTCGACCATGACACATTCACCGGGGATGACACAATGGGGGATGCAGAAATAGACATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGACCAACCTGCCGAGTGGTTGTATAGTGAAGAGAGTTCAACCAGATGGGAAAAACTACCTTGCTGAGGAGAGCAGCTGCATATGGAAGAATGGAAAAATCACCCAAGAAATGACTCTTGCTTTGAGAAACGTGGAATGTGGCTACGTAGTTGTCGAAATTGAGTGGAAGGAAATTCCAGGTTGCAAGGGCTTATCTGGGATTGAGATCTAA 513 0.4503 MDNVLGLLKLRIKRGISLAIRDTRSSDPYVVATLGDQKVKTRVVKNNRNPQWDDELTLSVKDVNSPVHLAVFDHDTFTGDDTMGDAEIDIKPYLQCLKMNLTNLPSGCIVKRVQPDGKNYLAEESSCIWKNGKITQEMTLALRNVECGYVVVEIEWKEIPGCKGLSGIEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3063g00002 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pral3063g00002 170 CDD C2_ArfGAP 5 148 - -
Pral3063g00002 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Pral3063g00002 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Pral3063g00002 170 Pfam C2 domain 7 92 IPR000008 -
Pral3063g00002 170 SMART C2_3c 7 102 IPR000008 -
Pral3063g00002 170 Gene3D C2 domain 2 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3063g00002 Pral-Chr3063 18471 20794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3063g00002 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 4.06e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3063g00002 - - qsa:O6P43_025854 256.529