Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3059g00001 ATGGACGAGACACTTGGTAATGATGCCGAGAACATCAATTCTGATTCTCTCGTCTGCTCCCTCCAAGATCCTAGCGTTAGCAAGATGAGCAATAATAGCAATGTTGAGTCTCAAAGCAGCACAGAATCCAACAGTTATGACGAAAGTTACAAGAGCAGCTCCAGCTGTATGAGCAATTACTCTAACAGTTGTGATGCCGATGATTCAAGTCTTAGGAGCTTTTGCCCTTGCAAGCCTCACAAAGGCAACGATATTCGATGGGATGCCATACAGTTCGTGAAAGCTAAGTACGGAGATTTGGGTTTGGGACACTTCAGGCTATTGAAGAAGCTGGGTTTTGGGGACATTGGGAGCGTGTATCTGGCCGAGCTTAAAGGGAAGGGTTGTCTCTTCGCAATGAAGGTCATGGATAAGGCAAAGTTGACTGCGAGGAGAAAGATGTCTAGAGTCCAGACTGAGAGGGACATTTTGGGTTCCTTGGACCACCCTTTCCTTCCCACCCTTTATTCTCATTTCCAAACAGAGAAATTCTCTTGCTTGCTTATGGAGTTCTGTAATGGTGGTGATCTTCACGTCCTCCGCCAGCGCCAGCCAGGCAAGCATTTCACAGAGCAAGCTGCAAGGTTTTACGCTTCTGAAGTTCTTCTTGCTCTTGAGTATCTCCACATGATGGGGGTGGTATACAGGGACTTGAAGCCCGAGAATGTACTGGTTCGGGAGGACGGTCATATCATGCTCTCTGATTTTGATCTATCATTAAGATGTTGTGTGAGACCTACCCTTGTTCAGTCCAACGAGGAACCGTCTTGTCGGGTTTCTTCCTACTGTGTCGAGCCATCTTCGTGCATAGACCCATCTTGCAAGCTATCTGTTTGTGTGGAGCCTTCGTGCCTGCAGTTGCAGCCTTCTTGCTTCAAACCCCATGTTTTCAATTCTAAAAAGACGAAGTCAAGGAGTGCTAAACAAAATTCAACAAACCCAGATTCATATCCTATGCTTATTGCTGAGCCAACCAACGCTCGCTCTATGTCATTTGTTGGGACTCATGAATATCTAGCCCCGGAGATTGTAAGAGGCGATGGACATGGTAGTGCTGTGGATTGGTGGACATTTGGTATTTTCTTGTATGAGTTGTTGCATGCGAAGACACCATTTAAGGGCAATGGAAACCGAGAGACACTATTCAACGTTGTTGGGCAGCCTCTTAAGTTTCCTGAAGGATCGAACATCAGTTTTGCTGCTAAGGATTTGATAAGAGGATTGCTTGTGAAAGACCCAAAGAAGAGGCTTGGGTTTCAGAGAGGTGCCTCTGAGATCAAACAACATCCTTTCTTTCAAAGTGTTAATTGGGCTCTAGTTCGTAGCAACCAACCCCCACTGATCCCAAAACCACTAGATCTTGCAGTTTTGAATGAGACTTTGAAGCCGTCAGTGCCAGTTAATAACAAAGGAAACTCTGATAATTCGGATAGGTCTTCAGGTCCTTACTTGGAGTTTGAATTTTTTTGA 1509 0.4533 MDETLGNDAENINSDSLVCSLQDPSVSKMSNNSNVESQSSTESNSYDESYKSSSSCMSNYSNSCDADDSSLRSFCPCKPHKGNDIRWDAIQFVKAKYGDLGLGHFRLLKKLGFGDIGSVYLAELKGKGCLFAMKVMDKAKLTARRKMSRVQTERDILGSLDHPFLPTLYSHFQTEKFSCLLMEFCNGGDLHVLRQRQPGKHFTEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVRPTLVQSNEEPSCRVSSYCVEPSSCIDPSCKLSVCVEPSCLQLQPSCFKPHVFNSKKTKSRSAKQNSTNPDSYPMLIAEPTNARSMSFVGTHEYLAPEIVRGDGHGSAVDWWTFGIFLYELLHAKTPFKGNGNRETLFNVVGQPLKFPEGSNISFAAKDLIRGLLVKDPKKRLGFQRGASEIKQHPFFQSVNWALVRSNQPPLIPKPLDLAVLNETLKPSVPVNNKGNSDNSDRSSGPYLEFEFF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3059g00001 502 PANTHER FLIPPASE KINASE 1-RELATED 27 467 - -
Pral3059g00001 502 FunFam serine/threonine-protein kinase D6PK-like 189 256 - -
Pral3059g00001 502 FunFam serine/threonine-protein kinase D6PK-like 340 463 - -
Pral3059g00001 502 Pfam Protein kinase domain 342 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3059g00001 502 Pfam Protein kinase domain 106 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3059g00001 502 SUPERFAMILY Protein kinase-like (PK-like) 83 472 IPR011009 -
Pral3059g00001 502 MobiDBLite consensus disorder prediction 23 46 - -
Pral3059g00001 502 CDD STKc_phototropin_like 104 468 - -
Pral3059g00001 502 Gene3D Transferase(Phosphotransferase) domain 1 340 463 - -
Pral3059g00001 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Pral3059g00001 502 SMART serkin_6 105 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3059g00001 502 Gene3D Phosphorylase Kinase; domain 1 103 188 - -
Pral3059g00001 502 ProSiteProfiles Protein kinase domain profile. 105 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3059g00001 502 FunFam Serine/threonine-protein kinase D6PK-like 103 188 - -
Pral3059g00001 502 Gene3D Transferase(Phosphotransferase) domain 1 189 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3059g00001 Pral-Chr3059 14493 16109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3059g00001 61 502 AGC Kinase Gene Family AT5G40030 75.000 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral3059g00001 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3059g00001 K08286 - qsa:O6P43_009038 753.821