Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3058g00005 ATGGCTGTTTCTTCAATCCTATACATTCTTCTTCTCTTATCTCTGTCTTTTCGATGTTCTTCATCTTCATCACTCAACAGTGGCTTCTCTCTCTCAGTGGAGAAACCAGAAGATGTTATCCTGTCACAAAACGGCGTCTTCTCTGCCGGCTTTTACCTCGTTGGTGAAAACGCCTGTGTATTCTCCGTTTGGTTCACCCAAACCCTCACTGTCGTTTGGACAGCAAACCGTGACCAACCCGTCAACGGAAAACGGTCATCACTTTCCCTTCTCAAAACTGGAAACCTTGTCCTCTCTGATGCCGGACAGTTCAACGTGTGGTCGACCGGCACCACCTCGTCTTTGCCGACCCAGTTGGTTCTTAACAACAATGGAAATCTAGAACTCTACGAGAACCCAATACGAGGAAGCAAAATTCTATGGCAGAGCTTTGATTTCCCGACAGACACTCTGCTTCCCGGACAACAACTGACAAGATTTACAAAGCTTGTCTCTGGCAGAAGTGAAACCAATCAATCATCTGGCTTCTACAAGTTTCTCTTTGACGACAACAACATTCTCAGCCTTTTGTACGACGGTCCCGATGTCTCCAGCAAATATTGGCCTTCGCCATGGCTTTTGAGCTGGGAAGCTGGAAGAAGCACCTATAACAGTAGCAGAATCGCAGTGTTAGATTCAATTGGAGGTTTCAGTTCAACAGACAAGTATAACTTCACAACTTCTGATTATGGGGCTTTGATACAAAGAAGATTGAAATTAGATCCTGATGGAAACATTCGAGTGTACAGCCTGCAGAATAATCTATGGAAGGTGACGTGGCAAGCCATATCTGATTCCTGTATCGTGCATGGAATTTGTGGTGCTAATAGTACTTGCATCTATGATCCTAAAGAAGGAAGGAAGTGCTTGTGTCTTCCAGGCTATAGAGTGAAGAACCATAGCGATTGGTCTTATGGTTGTGAACCCAAGTTTCAACTCTCGTGTGATAAAAATGAGTCTACCTTCTTCAAATTGTTCGATGTTGAGCTGTATGGGTATGACGTTGTCTATGTGAAAAACATCACTTTTAATGATTGTAAGGATGATTGTTTGAATGATTGTGACTGCAAGGCGTTTCAGTACACAATGGACCAGCAAGGCTTATTTCAATGCTTTACGAAAAGAGTTATGCTTAACGGTCATCATTCACCAAGTTTCGAAGGAGCGACCTACTTGAGACTCCCAAAATCCCTTAGCAGCAGTGTTTTGTTCCATGAAGAAGAAGAACCAACTCAAGAGAATGGTAATGTTTGCCCGGTGAAGCTTGAACGAGCCTATACCAAGAGACACGTCAGTAGTTTCGTGAAGTTCTTCCTTTGGTTCGCTGTCTCAATTGGGGTGGTTGAGGTCCTTCTCATTTTTACAATTTGGTGTTCTTTGATTACAAAACAAAACTCTAGTAGAAATCAACAAGGATACAATTTTCTCTCTCCTTTTGGGTTTAAAAGATTTACTTACTCTGAGCTAAAACAAGCAACAAAAGGGTTCACAGGAGAAATTGGAAGAGGCTCAGGTGGAATAGTGTACAAAGGAGTGTTGGGTGATCAAAGAATTGCAGCAATTAAGAAGCTGAACAATAACATCGTTGGAGCCAAACAAGAAGAAGGAGAATTCCTCGCTGAAGTGAGCATAATCGGTAGGCTTAACCACATGAACTTAATTGAAATGTGGGGGTATTGTGCAGAGGGAAAGCACAGGCTTTTGGTGTACGAGTACATGGGAAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACTTTGGATTGGACCAAAAGATACAACATCGCTCTTGGAACAGCAAGGGGCCTAGCCTACTTACATGAAGAATGCCTGGAGTGGATTCTGCATTGTGACATAAAGCCCCATAATATTCTTCTGGATTCAAATTACCAACCCAAGGTAGCAGATTTCGGCTTATCCAAGCTTCAAAATCGTAATGACCAAAACTCCAAAAATTTCTCAGTTATAAGAGGAACGAGGGGGTACATGGCACCTGAGTGGCTTTTTAATCTGCCAATAACGTCAAAGGTGGATGTGTATAGCTATGGGATCGTTGTGTTGGAGATGATAACAGGAAGGAGTCCGACGAGGATGGGAACTGGGACTGATGAAGACGAAGGAGCAAATAATGGGAGCCTTTTGACAAGGGTGAGAGAGAAGAGGAAGAAAACGACGTCGTGCAGTTGGGTGGAGCAGATACTGGACGCAGCCATTGTATCAGAGTATGGGGTTGAGAAGAGAAAGATGGAGACTCTGGCTAAAGTGGCTATGGAGTGTGTGGAAGAAGACAGAGATGCAAGGCCCACCATGAGCCAAGTTGTTGAGATGCTTCAGAGCCAGGAAGATGATGCTTGTTAG 2397 0.4339 MAVSSILYILLLLSLSFRCSSSSSLNSGFSLSVEKPEDVILSQNGVFSAGFYLVGENACVFSVWFTQTLTVVWTANRDQPVNGKRSSLSLLKTGNLVLSDAGQFNVWSTGTTSSLPTQLVLNNNGNLELYENPIRGSKILWQSFDFPTDTLLPGQQLTRFTKLVSGRSETNQSSGFYKFLFDDNNILSLLYDGPDVSSKYWPSPWLLSWEAGRSTYNSSRIAVLDSIGGFSSTDKYNFTTSDYGALIQRRLKLDPDGNIRVYSLQNNLWKVTWQAISDSCIVHGICGANSTCIYDPKEGRKCLCLPGYRVKNHSDWSYGCEPKFQLSCDKNESTFFKLFDVELYGYDVVYVKNITFNDCKDDCLNDCDCKAFQYTMDQQGLFQCFTKRVMLNGHHSPSFEGATYLRLPKSLSSSVLFHEEEEPTQENGNVCPVKLERAYTKRHVSSFVKFFLWFAVSIGVVEVLLIFTIWCSLITKQNSSRNQQGYNFLSPFGFKRFTYSELKQATKGFTGEIGRGSGGIVYKGVLGDQRIAAIKKLNNNIVGAKQEEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMGKGSLAENLKSNTLDWTKRYNIALGTARGLAYLHEECLEWILHCDIKPHNILLDSNYQPKVADFGLSKLQNRNDQNSKNFSVIRGTRGYMAPEWLFNLPITSKVDVYSYGIVVLEMITGRSPTRMGTGTDEDEGANNGSLLTRVREKRKKTTSCSWVEQILDAAIVSEYGVEKRKMETLAKVAMECVEEDRDARPTMSQVVEMLQSQEDDAC 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3058g00005 798 PIRSF SRK 1 797 IPR024171 GO:0004674
Pral3058g00005 798 SMART blect_4 31 147 IPR001480 -
Pral3058g00005 798 Gene3D Transferase(Phosphotransferase) domain 1 586 797 - -
Pral3058g00005 798 SUPERFAMILY Hairpin loop containing domain-like 330 386 - -
Pral3058g00005 798 Gene3D - 16 145 IPR036426 -
Pral3058g00005 798 SMART serkin_6 507 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3058g00005 798 Gene3D Phosphorylase Kinase; domain 1 471 585 - -
Pral3058g00005 798 Pfam Protein kinase domain 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3058g00005 798 PANTHER OS07G0415500 PROTEIN 4 794 - -
Pral3058g00005 798 SUPERFAMILY Protein kinase-like (PK-like) 484 791 IPR011009 -
Pral3058g00005 798 ProSiteProfiles EGF-like domain profile. 276 314 IPR000742 -
Pral3058g00005 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 204 IPR036426 -
Pral3058g00005 798 Pfam D-mannose binding lectin 70 159 IPR001480 -
Pral3058g00005 798 FunFam S-receptor-like serine/threonine-protein kinase 475 585 - -
Pral3058g00005 798 FunFam Putative receptor-like protein kinase 586 797 - -
Pral3058g00005 798 ProSiteProfiles Protein kinase domain profile. 507 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3058g00005 798 ProSiteProfiles Bulb-type lectin domain profile. 16 142 IPR001480 -
Pral3058g00005 798 CDD PAN_AP_plant 324 408 - -
Pral3058g00005 798 CDD EGF 280 313 - -
Pral3058g00005 798 ProSiteProfiles PAN/Apple domain profile. 328 411 IPR003609 -
Pral3058g00005 798 Pfam S-locus glycoprotein domain 233 311 IPR000858 GO:0048544
Pral3058g00005 798 Pfam PAN-like domain 328 387 IPR003609 -
Pral3058g00005 798 CDD STKc_IRAK 513 791 - -
Pral3058g00005 798 CDD B_lectin 40 147 IPR001480 -
Pral3058g00005 798 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Pral3058g00005 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3058g00005 Pral-Chr3058 13364 15867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3058g00005 497 795 Receptor kinase-like Gene Family AT1G56120 42.671 7.49e-60 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3058g00005 Pkinase 1.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3058g00005 - - gmx:100784287 968.378