Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3056g00001 ATGGAGTCTAGTTCCAGAGCAGGTCTGTCTGGCGGGGTTATTGCTGGAATATCTATTGGCGTCGTAGCTGGACTTCTGCTGTTGGCAGCTTCTATATATTTTGGATATTTCCGAAAGAAAATGGCTGACAAATTAATCTCTCAAGAGTTCCAAGAGTTCACTGTTGAAGAAGAGAAGGGATATGGTGGTCCTACTGGCATCACAGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTACTGCCACCAATAACTTCAGTTTGGCTAATAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTCTAGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATTGGATATTGCACTGAGAACTCTCTTTTCCTGGTTTATGAATACATTGATAATGGAAACTTAAGTCAACATCTGCGTGGCACAGGAAGAGATCCGCTGCCATGGTCTACCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGCCTTGAATATATTCACGAGCATACAGTTCCTGTGTATATCCACCGTGACATAAAGTCGGCAAATATATTGATAGATAACAGCTTCCATGGGAAGGTTGCAGATTTTGGATTAACTAAACTGGCTGAAGTGGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCGCCAGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTTGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCCGCCAAGGAAGCCATCGTCAAGACAACTCAATCTGATGCTGACTCAAAGGGCCTTGTAGCAATGTTTCATGGAGTTCTTAATCAGCCTGCTCCTACGGAAGATCTTCGCAAATTGGTTGACCCAAGGCTGGGGGATGACTACCCTATTGACTCAGTTTTGAAAATGGCTCAACTTGCAAAAGCATGCACACAAGAAAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTGCTCTCATGACACTTCATTCTTCCACTGCTGATGATTGGGACGTTGGTGCCTTGTACAATAATCCCAATCTCATGAATCTGATGTCGGGAAGATAA 1164 0.4296 MESSSRAGLSGGVIAGISIGVVAGLLLLAASIYFGYFRKKMAEXKLISQEFQEFTVEEEKGYGGPTGITVDKSVEFSYEELATATNNFSLANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEYIDNGNLSQHLRGTGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDNSFHGKVADFGLTKLAEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTTQSDADSKGLVAMFHGVLNQPAPTEDLRKLVDPRLGDDYPIDSVLKMAQLAKACTQENPQLRPTMRSIVVALMTLHSSTADDWDVGALYNNPNLMNLMSGR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3056g00001 388 ProSiteProfiles Protein kinase domain profile. 88 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3056g00001 388 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 373 IPR044812 GO:0019199|GO:0045087
Pral3056g00001 388 Gene3D Transferase(Phosphotransferase) domain 1 159 375 - -
Pral3056g00001 388 SMART serkin_6 88 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3056g00001 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pral3056g00001 388 SUPERFAMILY Protein kinase-like (PK-like) 70 359 IPR011009 -
Pral3056g00001 388 FunFam LysM receptor kinase 2 67 158 - -
Pral3056g00001 388 Pfam Protein tyrosine and serine/threonine kinase 90 358 IPR001245 GO:0004672|GO:0006468
Pral3056g00001 388 FunFam PTI1-like tyrosine-protein kinase 3 159 373 - -
Pral3056g00001 388 Gene3D Phosphorylase Kinase; domain 1 73 158 - -
Pral3056g00001 388 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3056g00001 Pral-Chr3056 58 5539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3056g00001 1 388 Receptor kinase-like Gene Family AT3G21630 63.342 9.87e-171 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral3056g00001 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3056g00001 K13429 - gmx:100777781 580.482